RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CYB5R4Q7L1T6 521 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 PNMA1Q8ND90 353 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 UNC93B1Q9H1C4 597 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 GPCPD1Q9NPB8 672 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 PRR12Q9ULL5 1215 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
TUBB3-214ENST00000557490 ERICH2A1L162 156 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 KCTD2Q14681 263 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 LRIT3Q3SXY7 679 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 SYDE2Q5VT97 1194 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 TTBK2Q6IQ55 1244 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 PRDM6Q9NQX0 595 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 TAF6LQ9Y6J9 622 aa18.59■□□□□ 0.57
TUBB3-214ENST00000557490 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
TUBB3-214ENST00000557490 LAMA2P24043 3122 aaKnown RBP18.58■□□□□ 0.56
TUBB3-214ENST00000557490 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
TUBB3-214ENST00000557490 SLC27A2O14975 620 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 SGPL1O95470 568 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 SNHG28P0DPA3 235 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 SLC16A2P36021 539 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 ZNF543Q08ER8 600 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.56
TUBB3-214ENST00000557490 NECTIN1Q15223 517 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 CCL14Q16627 93 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 GPATCH4Q5T3I0 446 aaKnown RBP18.58■□□□□ 0.56
TUBB3-214ENST00000557490 RNF20Q5VTR2 975 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
TUBB3-214ENST00000557490 RPTORQ8N122 1335 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 PRKAR2AP13861 404 aaKnown RBP18.57■□□□□ 0.56
TUBB3-214ENST00000557490 TRIM32Q13049 653 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 SEC23AQ15436 765 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 CCDC174Q6PII3 467 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 CHST13Q8NET6 341 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 NPLOC4Q8TAT6 608 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 HMX1Q9NP08 348 aaPredicted RBP18.57■□□□□ 0.56
TUBB3-214ENST00000557490 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 RIPK3Q9Y572 518 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 PLXNB2O15031 1838 aa18.57■□□□□ 0.56
TUBB3-214ENST00000557490 COBLO75128 1261 aa18.56■□□□□ 0.56
TUBB3-214ENST00000557490 SNAP25P60880 206 aa18.56■□□□□ 0.56
TUBB3-214ENST00000557490 TKFCQ3LXA3 575 aa18.56■□□□□ 0.56
TUBB3-214ENST00000557490 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.568e-7■■■■□ 24.2
TUBB3-214ENST00000557490 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
TUBB3-214ENST00000557490 GOLGA8HP0CJ92 632 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 WTAPQ15007 396 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 TMEM67Q5HYA8 995 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 MAP3K21Q5TCX8 1036 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 OLFML2BQ68BL8 750 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 CHST3Q7LGC8 479 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
TUBB3-214ENST00000557490 DDX11Q96FC9 970 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 AGBL1Q96MI9 1066 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 RANBP17Q9H2T7 1088 aaKnown RBP18.55■□□□□ 0.56
TUBB3-214ENST00000557490 PAK6Q9NQU5 681 aaPredicted RBP18.55■□□□□ 0.56
TUBB3-214ENST00000557490 HOMER2Q9NSB8 354 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 FLRT1Q9NZU1 646 aa18.55■□□□□ 0.56
TUBB3-214ENST00000557490 ZNF536O15090 1300 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 COL11A1P12107 1806 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-214ENST00000557490 PGK2P07205 417 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 CAPN2P17655 700 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 CACNB2Q08289 660 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-214ENST00000557490 ANKRD35Q8N283 1001 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 ACAD9Q9H845 621 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 RNF146Q9NTX7 359 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 CCPG1Q9ULG6 757 aa18.54■□□□□ 0.56
TUBB3-214ENST00000557490 ZMYND8Q9ULU4 1186 aaPredicted RBP18.54■□□□□ 0.56
TUBB3-214ENST00000557490 DIS3Q9Y2L1 958 aaKnown RBP18.54■□□□□ 0.56
TUBB3-214ENST00000557490 TFRCP02786 760 aaKnown RBP18.53■□□□□ 0.56
TUBB3-214ENST00000557490 ICAM1P05362 532 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 ALAS1P13196 640 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 MCM5P33992 734 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.53■□□□□ 0.56
TUBB3-214ENST00000557490 TDHQ8IZJ6 230 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 MAML3Q96JK9 1138 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 TRERF1Q96PN7 1200 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
TUBB3-214ENST00000557490 MUC3AQ02505 3323 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 PRC1O43663 620 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 REC8O95072 547 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 CYP2C19P33261 490 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 ANTXR2P58335 489 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 ZNF792Q3KQV3 632 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 C7orf61Q8IZ16 206 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 PAWRQ96IZ0 340 aaKnown RBP18.52■□□□□ 0.56
TUBB3-214ENST00000557490 MTA3Q9BTC8 594 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
TUBB3-214ENST00000557490 DHX16O60231 1041 aaKnown RBP18.51■□□□□ 0.55
TUBB3-214ENST00000557490 CCND3P30281 292 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-214ENST00000557490 IGDCC4Q8TDY8 1250 aa18.51■□□□□ 0.55
TUBB3-214ENST00000557490 TMEM87BQ96K49 555 aa18.51■□□□□ 0.55
TUBB3-214ENST00000557490 DNAJC25-GNG10A0A024R161 153 aa18.5■□□□□ 0.55
TUBB3-214ENST00000557490 IGHA2P01877 340 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms