RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 C11orf57Q6ZUT1 292 aaPredicted RBP18.63■□□□□ 0.57
PCNX1-209ENST00000554879 NBPF11Q86T75 865 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 FERMT2Q96AC1 680 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 NCBP1Q09161 790 aaKnown RBP18.63■□□□□ 0.57
PCNX1-209ENST00000554879 FOXP4Q8IVH2 680 aaPredicted RBP18.63■□□□□ 0.57
PCNX1-209ENST00000554879 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 IFNKQ9P0W0 207 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 ANKRD65E5RJM6 399 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 RCAN1P53805 252 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 ZSCAN26Q16670 478 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 UBE2SQ16763 222 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 TRMT44Q8IYL2 757 aaKnown RBP18.63■□□□□ 0.57
PCNX1-209ENST00000554879 IL17RBQ9NRM6 502 aa18.63■□□□□ 0.57
PCNX1-209ENST00000554879 FAM205AQ6ZU69 1335 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 LONRF3Q496Y0 759 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 PKD2L1Q9P0L9 805 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 FEZ2Q9UHY8 353 aaPredicted RBP18.62■□□□□ 0.57
PCNX1-209ENST00000554879 PCDHA5Q9Y5H7 936 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 CBFA2T2O43439 604 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 NEMFO60524 1076 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 SLFN14P0C7P3 912 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 TECP42680 631 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 UBASH3AP57075 661 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 LRMPQ12912 555 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 WWC2Q6AWC2 1192 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 FAM212AQ96EL1 285 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 CENPHQ9H3R5 247 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 DPCR1Q3MIW9 517 aa18.62■□□□□ 0.57
PCNX1-209ENST00000554879 GPATCH4Q5T3I0 446 aaKnown RBP18.62■□□□□ 0.57
PCNX1-209ENST00000554879 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
PCNX1-209ENST00000554879 ZFPM1Q8IX07 1006 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 FBXL16Q8N461 479 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 EFCC1Q9HA90 598 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 ZNRF3Q9ULT6 936 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 COL1A1P02452 1464 aaPredicted RBP18.61■□□□□ 0.57
PCNX1-209ENST00000554879 PLS1Q14651 629 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 KRT79Q5XKE5 535 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 RHBDL3P58872 404 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 MICALL1Q8N3F8 863 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 TBCKQ8TEA7 893 aa18.61■□□□□ 0.57
PCNX1-209ENST00000554879 USP17L10C9JJH3 530 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 NEK8Q86SG6 692 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCNX1-209ENST00000554879 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
PCNX1-209ENST00000554879 CAMKK2Q96RR4 588 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 CALCRLQ16602 461 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 DDX41Q9UJV9 622 aaKnown RBP18.6■□□□□ 0.57
PCNX1-209ENST00000554879 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
PCNX1-209ENST00000554879 CASQ1P31415 396 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 C15orf52Q6ZUT6 534 aaKnown RBP18.6■□□□□ 0.57
PCNX1-209ENST00000554879 PPFIBP1Q86W92 1011 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 CCDC102AQ96A19 550 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 LRWD1Q9UFC0 647 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 BTAF1O14981 1849 aa18.6■□□□□ 0.57
PCNX1-209ENST00000554879 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 URI1O94763 535 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 NLRP12P59046 1061 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 ICE2Q659A1 982 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 RSBN1LQ6PCB5 846 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 CCDC84Q86UT8 332 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 SAMM50Q9Y512 469 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 CCDC91Q7Z6B0 441 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 ILDR1Q86SU0 546 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 FMR1NBQ8N0W7 255 aaPredicted RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 SH2D4AQ9H788 454 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 CAPN2P17655 700 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 CASP1P29466 404 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 SHC4Q6S5L8 630 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 PYM1Q9BRP8 204 aaKnown RBP18.59■□□□□ 0.57
PCNX1-209ENST00000554879 TMEM260Q9NX78 707 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 JRKLQ9Y4A0 524 aa18.59■□□□□ 0.57
PCNX1-209ENST00000554879 MYL5Q02045 173 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 APOBEC3HQ6NTF7 200 aaKnown RBP18.58■□□□□ 0.57
PCNX1-209ENST00000554879 TMEM179Q6ZVK1 233 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 FBXO11Q86XK2 927 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 GOPCQ9HD26 462 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 EXOC1Q9NV70 894 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 NUP188Q5SRE5 1749 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 TAF1P21675 1872 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 AMPD3Q01432 767 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 PICK1Q9NRD5 415 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 TJP1Q07157 1748 aa18.58■□□□□ 0.57
PCNX1-209ENST00000554879 COBLO75128 1261 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 BMP3P12645 472 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
PCNX1-209ENST00000554879 GRIN1Q05586 938 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 DACT2Q5SW24 774 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 F5H6K3 240 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 KLRC3Q07444 240 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 USP49Q70CQ1 688 aa18.58■□□□□ 0.56
PCNX1-209ENST00000554879 CHMP2AO43633 222 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 PTPREP23469 700 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 PHF20Q9BVI0 1012 aa18.57■□□□□ 0.56
PCNX1-209ENST00000554879 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms