RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NTF4P34130 210 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 DAB2P98082 770 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 EZH2Q15910 746 aaKnown RBP5.73□□□□□ -1.49
VTI1B-203ENST00000554636 DDB1Q16531 1140 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 ZBTB37Q5TC79 503 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 ZNF574Q6ZN55 896 aaPredicted RBP5.73□□□□□ -1.49
VTI1B-203ENST00000554636 FBXO33Q7Z6M2 555 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 MARCH10Q8NA82 808 aaPredicted RBP5.73□□□□□ -1.49
VTI1B-203ENST00000554636 PSMG3-AS1Q96PY0 264 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 CAMKK2Q96RR4 588 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 MEGF6O75095 1541 aa5.73□□□□□ -1.49
VTI1B-203ENST00000554636 KIF24Q5T7B8 1368 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 IL2RBP14784 551 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 CD96P40200 585 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 LIG3P49916 1009 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
VTI1B-203ENST00000554636 BNIP3Q12983 259 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 RRS1Q15050 365 aaKnown RBP5.72□□□□□ -1.49
VTI1B-203ENST00000554636 MCTP1Q6DN14 999 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 NFXL1Q6ZNB6 911 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 PTF1AQ7RTS3 328 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 HDXQ7Z353 690 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 JARID2Q92833 1246 aaPredicted RBP5.72□□□□□ -1.49
VTI1B-203ENST00000554636 FBRSQ9HAH7 460 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 MRS2Q9HD23 443 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 VTI1BQ9UEU0 232 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 TLR6Q9Y2C9 796 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 NCAPD2Q15021 1401 aa5.72□□□□□ -1.49
VTI1B-203ENST00000554636 INSRP06213 1382 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 FLT4P35916 1363 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 FANCGO15287 622 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 PRNPP04156 253 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 CTSHP09668 335 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 ARMCX6Q7L4S7 300 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 XAGE3Q8WTP9 111 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 LTV1Q96GA3 475 aaPredicted RBP5.71□□□□□ -1.5
VTI1B-203ENST00000554636 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 BTAF1O14981 1849 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 MAP2P11137 1827 aaKnown RBP5.71□□□□□ -1.5
VTI1B-203ENST00000554636 CGNL1Q0VF96 1302 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 DOT1LQ8TEK3 1739 aa5.71□□□□□ -1.5
VTI1B-203ENST00000554636 PAPPAQ13219 1627 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 EXOC5O00471 708 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 TAL1P17542 331 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-203ENST00000554636 GRK4P32298 578 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 AMPHP49418 695 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 RING1Q06587 406 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 TAF1CQ15572 869 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-203ENST00000554636 HSP90AB2PQ58FF8 381 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 ZNF507Q8TCN5 953 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 NETO1Q8TDF5 533 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 FBXL18Q96ME1 805 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 MIR1-1HGQ9H1L0 117 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 PAK6Q9NQU5 681 aaPredicted RBP5.7□□□□□ -1.5
VTI1B-203ENST00000554636 SLC5A6Q9Y289 635 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 SMG6Q86US8 1419 aaKnown RBP5.7□□□□□ -1.5
VTI1B-203ENST00000554636 PKD1L3Q7Z443 1732 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 CASZ1Q86V15 1759 aa5.7□□□□□ -1.5
VTI1B-203ENST00000554636 NSD2O96028 1365 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 SORBS3O60504 671 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 CEACAM5P06731 702 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-203ENST00000554636 OXCT1P55809 520 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 R3HDM1Q15032 1099 aaKnown RBP5.69□□□□□ -1.5
VTI1B-203ENST00000554636 NKG7Q16617 165 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 NBPF6Q5VWK0 638 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 AGMOQ6ZNB7 445 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 CYFIP1Q7L576 1253 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 TMC4Q7Z404 712 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 SPRED2Q7Z698 418 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 BCL7CQ8WUZ0 217 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-203ENST00000554636 NBPF4Q96M43 638 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 HEXIM2Q96MH2 286 aaKnown RBP5.69□□□□□ -1.5
VTI1B-203ENST00000554636 MIPEPQ99797 713 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 DPH2Q9BQC3 489 aaPredicted RBP5.69□□□□□ -1.5
VTI1B-203ENST00000554636 POLR3GLQ9BT43 218 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 PANK3Q9H999 370 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 KAT6BQ8WYB5 2073 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 KIF7Q2M1P5 1343 aa5.69□□□□□ -1.5
VTI1B-203ENST00000554636 TOGARAM1Q9Y4F4 1720 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 RBAK-RBAKDNI3L0D1 243 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 PLSCR1O15162 318 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 KCNQ2O43526 872 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 RPS26P62854 115 aaKnown RBP5.68□□□□□ -1.5
VTI1B-203ENST00000554636 PLCL1Q15111 1095 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 IFI16Q16666 785 aaKnown RBP5.68□□□□□ -1.5
VTI1B-203ENST00000554636 SCARA3Q6AZY7 606 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 USHBP1Q8N6Y0 703 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 KCT2Q8NC54 265 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 CRELD1Q96HD1 420 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 BCL2L13Q9BXK5 485 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 WNT10AQ9GZT5 417 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 POLKQ9UBT6 870 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 ADGRE2Q9UHX3 823 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 TPX2Q9ULW0 747 aaKnown RBP5.68□□□□□ -1.5
VTI1B-203ENST00000554636 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 LY75O60449 1722 aa5.68□□□□□ -1.5
VTI1B-203ENST00000554636 CD8BP10966 210 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 SLBPQ14493 270 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms