RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SNHG28P0DPA3 235 aa15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 PDHBP11177 359 aa15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 ZSCAN10Q96SZ4 725 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 ZNF536O15090 1300 aa15.45■□□□□ 0.06
HNRNPC-205ENST00000553300 B4E1Z4 1266 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 DNM1LO00429 736 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 ICAM1P05362 532 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 ZNF543Q08ER8 600 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 TRDNQ13061 729 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 CHMP4CQ96CF2 233 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 AGBL1Q96MI9 1066 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 IL25Q9H293 177 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 ZSWIM5Q9P217 1185 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 PFASO15067 1338 aa15.44■□□□□ 0.06
HNRNPC-205ENST00000553300 SGSM2O43147 1006 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 ALAS1P13196 640 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 PRAMEF19Q5SWL8 479 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 ZKSCAN3Q9BRR0 538 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 UBAC1Q9BSL1 405 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 KAT14Q9H8E8 782 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 HOMER2Q9NSB8 354 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 CCPG1Q9ULG6 757 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 SMCHD1A6NHR9 2005 aa15.43■□□□□ 0.06
HNRNPC-205ENST00000553300 FRMPD3Q5JV73 1810 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 KBTBD13C9JR72 458 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 RARBP10826 455 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 AKR1A1P14550 325 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 TTBK2Q6IQ55 1244 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 CCDC174Q6PII3 467 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 ABHD16BQ9H3Z7 469 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
HNRNPC-205ENST00000553300 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 ZNF865P0CJ78 1059 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 SLC16A2P36021 539 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 KIAA1211Q6ZU35 1233 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 ENAHQ8N8S7 591 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 FAM133AQ8N9E0 248 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 MAP4K1Q92918 833 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 SENP6Q9GZR1 1112 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 A1CFQ9NQ94 594 aaKnown RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 TNKSO95271 1327 aa15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-205ENST00000553300 RANBP2P49792 3224 aaKnown RBP15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 ASB14A6NK59 587 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 PTH1RQ03431 593 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 ASPRV1Q53RT3 343 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 IFIT1BQ5T764 474 aaKnown RBP15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 RASGRP2Q7LDG7 609 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 RNF180Q86T96 592 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 MAF1Q9H063 256 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 XPNPEP3Q9NQH7 507 aa15.4■□□□□ 0.06
HNRNPC-205ENST00000553300 DNAH12Q6ZR08 3092 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 CYP21A2P08686 494 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 SNAP25P60880 206 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 ACVR2BQ13705 512 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 BMP2KLQ5H9B9 411 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 RALYLQ86SE5 291 aaKnown RBP15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 C7orf61Q8IZ16 206 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 COLQQ9Y215 455 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 WDR19Q8NEZ3 1342 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 ALPK3Q96L96 1907 aa15.39■□□□□ 0.05
HNRNPC-205ENST00000553300 ERICH2A1L162 156 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 SART3Q15020 963 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 LRRC41Q15345 812 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 MUM1L1Q5H9M0 696 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 ANO1Q5XXA6 986 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 CCDC144CPQ8IYA2 1237 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 ADD3Q9UEY8 706 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 TRIOBPQ9H2D6 2365 aa15.38■□□□□ 0.05
HNRNPC-205ENST00000553300 E7EWF7 191 aa15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 DUSP11O75319 330 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 CNTN2Q02246 1040 aa15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 NSMFQ6X4W1 530 aa15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 FGD4Q96M96 766 aa15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 TSEN34Q9BSV6 310 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 ZHX1Q9UKY1 873 aaPredicted RBP15.37■□□□□ 0.05
HNRNPC-205ENST00000553300 A0A1W2PPC1 479 aa15.36■□□□□ 0.05
HNRNPC-205ENST00000553300 SOWAHBA6NEL2 793 aa15.36■□□□□ 0.05
HNRNPC-205ENST00000553300 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms