RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PFKFB1P16118 471 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 QRICH1Q2TAL8 776 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 TSPY26PQ9H489 355 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 VCPKMTQ9H867 229 aa22.36■■□□□ 1.17
RBFOX1-215ENST00000553186 PRAMEF18Q5VWM3 479 aa22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 CDC37Q16543 378 aaPredicted RBP22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 SYDE2Q5VT97 1194 aa22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 SH2D4AQ9H788 454 aa22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 GINM1Q9NU53 330 aa22.35■■□□□ 1.17
RBFOX1-215ENST00000553186 KINO60870 393 aaKnown RBP22.34■■□□□ 1.17
RBFOX1-215ENST00000553186 ATP2C1P98194 919 aaPredicted RBP22.34■■□□□ 1.17
RBFOX1-215ENST00000553186 KRT25Q7Z3Z0 450 aa22.34■■□□□ 1.17
RBFOX1-215ENST00000553186 REXO1Q8N1G1 1221 aaKnown RBP22.34■■□□□ 1.17
RBFOX1-215ENST00000553186 ADARB2Q9NS39 739 aaKnown RBP22.34■■□□□ 1.17
RBFOX1-215ENST00000553186 INPP5BP32019 993 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 ADCY7P51828 1080 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 PTGDRQ13258 359 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 INF2Q27J81 1249 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 DCAF15Q66K64 600 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 CKAP2LQ8IYA6 745 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 ZNF112Q9UJU3 913 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 PPP2R3BQ9Y5P8 575 aa22.33■■□□□ 1.17
RBFOX1-215ENST00000553186 FAM83BQ5T0W9 1011 aa22.33■■□□□ 1.16
RBFOX1-215ENST00000553186 RIC8AQ9NPQ8 531 aa22.33■■□□□ 1.16
RBFOX1-215ENST00000553186 ZNF202O95125 648 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 LMOD1P29536 600 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 MCM7P33993 719 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 C4orf32Q8N8J7 132 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 ZNF341Q9BYN7 854 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 BIN2Q9UBW5 565 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 PITPNM2Q9BZ72 1349 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 CTAGE5O15320 804 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 STAT2P52630 851 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 IKQ13123 557 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 ZYXQ15942 572 aaKnown RBP22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 SPECC1Q5M775 1068 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 HOOK2Q96ED9 719 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
RBFOX1-215ENST00000553186 NONOQ15233 471 aaKnown RBP eCLIP22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 FERMT2Q96AC1 680 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 TMEM260Q9NX78 707 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 SYKP43405 635 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 CLK2P49760 499 aaKnown RBP22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 SNAP25P60880 206 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 JAKMIP3Q5VZ66 844 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 CSRNP2Q9H175 543 aa22.31■■□□□ 1.16
RBFOX1-215ENST00000553186 PLA2G6O60733 806 aa22.3■■□□□ 1.16
RBFOX1-215ENST00000553186 SSC5DA1L4H1 1573 aa22.3■■□□□ 1.16
RBFOX1-215ENST00000553186 CUL5Q93034 780 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 AMNQ9BXJ7 453 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 PANK2Q9BZ23 570 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 KIAA1683Q9H0B3 1180 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 PSTPIP2Q9H939 334 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 KCNH3Q9ULD8 1083 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 CCDC192P0DO97 292 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 MRPL12P52815 198 aaKnown RBP22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 L3MBTL3Q96JM7 780 aaPredicted RBP22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 TIGD1Q96MW7 591 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 FZD1Q9UP38 647 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 ATAD5Q96QE3 1844 aa22.29■■□□□ 1.16
RBFOX1-215ENST00000553186 IL17AQ16552 155 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 USP49Q70CQ1 688 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 SCYL3Q8IZE3 742 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 WRNIP1Q96S55 665 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 FEZ1Q99689 392 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 GPR162Q16538 588 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 UBE2SQ16763 222 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 ARL6IP4Q66PJ3 421 aaKnown RBP22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 DPY19L2Q6NUT2 758 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 NEK8Q86SG6 692 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 FBXO11Q86XK2 927 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 CHURC1Q8WUH1 139 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 ZKSCAN4Q969J2 545 aaPredicted RBP22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 SDF4Q9BRK5 362 aa22.28■■□□□ 1.16
RBFOX1-215ENST00000553186 EDIL3O43854 480 aa22.27■■□□□ 1.16
RBFOX1-215ENST00000553186 TYRO3Q06418 890 aa22.27■■□□□ 1.16
RBFOX1-215ENST00000553186 RNF214Q8ND24 703 aa22.27■■□□□ 1.16
RBFOX1-215ENST00000553186 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 LPAR1Q92633 364 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 GLT8D2Q9H1C3 349 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 TMEM60Q9H2L4 133 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 FAM13BQ9NYF5 915 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 VWA3AA6NCI4 1184 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 LETM2Q2VYF4 491 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 FAM160B2Q86V87 743 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 FEM1BQ9UK73 627 aa22.26■■□□□ 1.15
RBFOX1-215ENST00000553186 PTPRAP18433 802 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 LONRF3Q496Y0 759 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 EPSTI1Q96J88 318 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 WDR18Q9BV38 432 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 RANBP17Q9H2T7 1088 aaKnown RBP22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 FBXO28Q9NVF7 368 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 USH1GQ495M9 461 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 DLK2Q6UY11 383 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 KIFC2Q96AC6 838 aa22.25■■□□□ 1.15
RBFOX1-215ENST00000553186 USP17L15C9J2P7 530 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 638 ms