RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 KRT2P35908 639 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 ARHGAP25P42331 645 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
HDAC7-230ENST00000552960 CAVIN4Q5BKX8 364 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 CDKAL1Q5VV42 579 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 STK36Q9NRP7 1315 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 NDUFA10O95299 355 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 PAK1Q13153 545 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 PSMB7Q99436 277 aa13.87□□□□□ -0.19
HDAC7-230ENST00000552960 POLRMTO00411 1230 aaKnown RBP13.86□□□□□ -0.19
HDAC7-230ENST00000552960 ZNF185O15231 689 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 PBX1P40424 430 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 FBXO33Q7Z6M2 555 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 PACS2Q86VP3 889 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 AATFQ9NY61 560 aaKnown RBP eCLIP13.86□□□□□ -0.194e-7■□□□□ 10
HDAC7-230ENST00000552960 SAR1BQ9Y6B6 198 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
HDAC7-230ENST00000552960 STIM1Q13586 685 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
HDAC7-230ENST00000552960 HIBADHP31937 336 aaKnown RBP13.86□□□□□ -0.19
HDAC7-230ENST00000552960 GGCXP38435 758 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 GPSM2P81274 684 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 TUBB2AQ13885 445 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 SLC27A3Q5K4L6 730 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 PIK3AP1Q6ZUJ8 805 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 TUBB2BQ9BVA1 445 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-230ENST00000552960 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 UBR3Q6ZT12 1888 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 TNKSO95271 1327 aa13.86□□□□□ -0.19
HDAC7-230ENST00000552960 IPO7O95373 1038 aaKnown RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 GRAPQ13588 217 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 TCP11X2Q5H9J9 407 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 TTC38Q5R3I4 469 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 IQUBQ8NA54 791 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 CCDC51Q96ER9 411 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MYH7P12883 1935 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MAGEA9P43362 315 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 PPARDQ03181 441 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 JRKLQ9Y4A0 524 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 RXRBP28702 533 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MECOMQ03112 1051 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MAP9Q49MG5 647 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 ARAP2Q8WZ64 1704 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 SHISA4Q96DD7 197 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
HDAC7-230ENST00000552960 DUSP10Q9Y6W6 482 aa13.85□□□□□ -0.19
HDAC7-230ENST00000552960 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
HDAC7-230ENST00000552960 CCT5P48643 541 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 USP14P54578 494 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 ICE2Q659A1 982 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 JAKMIP2Q96AA8 810 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 XDHP47989 1333 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
HDAC7-230ENST00000552960 C2orf54Q08AI8 447 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 ZNF772Q68DY9 489 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-230ENST00000552960 EHD4Q9H223 541 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 REXO2Q9Y3B8 237 aaKnown RBP13.84□□□□□ -0.19
HDAC7-230ENST00000552960 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
HDAC7-230ENST00000552960 MYBL2P10244 700 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 IDEP14735 1019 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 ADRA2BP18089 450 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 ERCC3P19447 782 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 PRCPP42785 496 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 LIG3P49916 1009 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 NLRP5P59047 1200 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 IFIT1BQ5T764 474 aaKnown RBP13.83□□□□□ -0.19
HDAC7-230ENST00000552960 TRIM47Q96LD4 638 aa13.83□□□□□ -0.19
HDAC7-230ENST00000552960 DNA2P51530 1060 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 TUBB4BP68371 445 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 AMPD2Q01433 879 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 PPARAQ07869 468 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
HDAC7-230ENST00000552960 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.2
HDAC7-230ENST00000552960 SPAG1Q07617 926 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 TMTC2Q8N394 836 aa13.83□□□□□ -0.2
HDAC7-230ENST00000552960 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms