RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 FAAP100Q0VG06 881 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 FAM109BQ6ICB4 259 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 CRBNQ96SW2 442 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 NAPBQ9H115 298 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 TTYH1Q9H313 450 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF40B-212ENST00000551111 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 KIAA0355O15063 1070 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 ERC2O15083 957 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 CTAGE5O15320 804 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 CLTBP09497 229 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 ARMCX2Q7L311 632 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 CCDC144CPQ8IYA2 1237 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 ANKRD35Q8N283 1001 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 PURBQ96QR8 312 aaKnown RBP13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
PRPF40B-212ENST00000551111 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 PDE4BQ07343 736 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 MSL3Q8N5Y2 521 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 SEMA6BQ9H3T3 888 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 A1CFQ9NQ94 594 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-212ENST00000551111 MYH6P13533 1939 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 ASGR1P07306 291 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 C6orf222P0C671 652 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 RAG1P15918 1043 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 CDK7P50613 346 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 BEX3Q00994 111 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 TTBK2Q6IQ55 1244 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 CCDC174Q6PII3 467 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 ANKRD33Q7Z3H0 272 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
PRPF40B-212ENST00000551111 SCN5AQ14524 2016 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 A0A0D9SFI3 127 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 ALAS1P13196 640 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 SLC1A4P43007 532 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 STAT2P52630 851 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 OAZ1P54368 228 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 PDE1AP54750 535 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 GMCL1Q96IK5 515 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 TRERF1Q96PN7 1200 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 UPF3AQ9H1J1 476 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
PRPF40B-212ENST00000551111 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 SLC16A2P36021 539 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 GJA9P57773 515 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 LRRFIP1Q32MZ4 808 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 FBXO40Q9UH90 709 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
PRPF40B-212ENST00000551111 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 FGAP02671 866 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 NOVP48745 357 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 EEPD1Q7L9B9 569 aa13.69□□□□□ -0.22
PRPF40B-212ENST00000551111 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms