RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 SYDE2Q5VT97 1194 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 CCDC174Q6PII3 467 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 RALYLQ86SE5 291 aaKnown RBP7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 DPP9Q86TI2 863 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 KCNB2Q92953 911 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 SHISA4Q96DD7 197 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 MMP19Q99542 508 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 APBA2Q99767 749 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 RANBP17Q9H2T7 1088 aaKnown RBP7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 LY9Q9HBG7 655 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 PAK6Q9NQU5 681 aaPredicted RBP7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 HOMER2Q9NSB8 354 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 MAD2L2Q9UI95 211 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 CTDP1Q9Y5B0 961 aaPredicted RBP7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 DOCK3Q8IZD9 2030 aa7.6□□□□□ -1.19
TMEM106C-215ENST00000550552 PLXNB2O15031 1838 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 RPTORQ8N122 1335 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 A0A0G2JMZ2 1700 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 SGPL1O95470 568 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 ICAM1P05362 532 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 PRKAR2AP13861 404 aaKnown RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 CCND3P30281 292 aaPredicted RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 MCM5P33992 734 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 GJA8P48165 433 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 KCTD2Q14681 263 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 PRAMEF19Q5SWL8 479 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 GPATCH4Q5T3I0 446 aaKnown RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 OLFML2BQ68BL8 750 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 ADGRF4Q8IZF3 695 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 TRPV1Q8NER1 839 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 CHST13Q8NET6 341 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 U2AF1L4Q8WU68 220 aaKnown RBP7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 UBE2Q2Q8WVN8 375 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 MAML3Q96JK9 1138 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 DEFB118Q96PH6 123 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 NEK1Q96PY6 1258 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 USP26Q9BXU7 913 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 LRRC2Q9BYS8 371 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 JMJD4Q9H9V9 463 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 VAT1LQ9HCJ6 419 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 MGAMO43451 1857 aa7.59□□□□□ -1.19
TMEM106C-215ENST00000550552 DNAH12Q6ZR08 3092 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 ERICH2A1L162 156 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 KLRF2D3W0D1 207 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 SH2B2O14492 632 aaPredicted RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 PARP1P09874 1014 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 ALAS1P13196 640 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 CPA1P15085 419 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 HSPA4P34932 840 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 COPB2P35606 906 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 MNX1P50219 401 aaPredicted RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 CNTN2Q02246 1040 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 WTAPQ15007 396 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 ASPRV1Q53RT3 343 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 RNF20Q5VTR2 975 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 MFSD14CQ5VZR4 134 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 LHX8Q68G74 356 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 UBE2Q1Q7Z7E8 422 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 ANKRD35Q8N283 1001 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 CLEC4DQ8WXI8 215 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 DDX11Q96FC9 970 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 FGD4Q96M96 766 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 TCEANC2Q96MN5 208 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 PURBQ96QR8 312 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 TINF2Q9BSI4 451 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 MTA3Q9BTC8 594 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 MYL10Q9BUA6 226 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 CRISPLD2Q9H0B8 497 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 HMX1Q9NP08 348 aaPredicted RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 A1CFQ9NQ94 594 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 RNF146Q9NTX7 359 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 FBXO40Q9UH90 709 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 CCPG1Q9ULG6 757 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 DIS3Q9Y2L1 958 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 SNX14Q9Y5W7 946 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 DDX49Q9Y6V7 483 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 KIAA0100Q14667 2235 aaKnown RBP7.58□□□□□ -1.2
TMEM106C-215ENST00000550552 LAMA4Q16363 1823 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 PARP14Q460N5 1801 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 SOWAHBA6NEL2 793 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 NFIBO00712 420 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 CYTH3O43739 400 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 PPP1R11O60927 126 aaPredicted RBP7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 REC8O95072 547 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 SNAI1O95863 264 aaPredicted RBP7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 TFRCP02786 760 aaKnown RBP7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 CYBAP13498 195 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 LIFRP42702 1097 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 GRM4Q14833 912 aa7.57□□□□□ -1.2
TMEM106C-215ENST00000550552 SART3Q15020 963 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms