RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MCCP23508 829 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 CCDC96Q2M329 555 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 RRP12Q5JTH9 1297 aaKnown RBP15.84■□□□□ 0.13
NUP188-211ENST00000550219 CCDC174Q6PII3 467 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 CHST13Q8NET6 341 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 BADQ92934 168 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 RILPL2Q969X0 211 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.84■□□□□ 0.13
NUP188-211ENST00000550219 FBXO40Q9UH90 709 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 FAM184BQ9ULE4 1060 aa15.84■□□□□ 0.13
NUP188-211ENST00000550219 A0A0D9SFI3 127 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 ADAMTS4O75173 837 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 OAZ1P54368 228 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 SNAP25P60880 206 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 TLE2Q04725 743 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 GPR153Q6NV75 609 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 FAM160B2Q86V87 743 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 MSL3Q8N5Y2 521 aaKnown RBP15.83■□□□□ 0.12
NUP188-211ENST00000550219 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 FAM227BQ96M60 508 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 ACAD9Q9H845 621 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 RNF146Q9NTX7 359 aa15.83■□□□□ 0.12
NUP188-211ENST00000550219 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 MYADML2A6NDP7 307 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 CLTBP09497 229 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 ALAS1P13196 640 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
NUP188-211ENST00000550219 ACVR2BQ13705 512 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 MAMDC4Q6UXC1 1216 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 ARMCX2Q7L311 632 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 ZNF467Q7Z7K2 595 aaPredicted RBP15.82■□□□□ 0.12
NUP188-211ENST00000550219 SLC17A8Q8NDX2 589 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 CHURC1Q8WUH1 139 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
NUP188-211ENST00000550219 FGD4Q96M96 766 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 AGBL1Q96MI9 1066 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 FAM161BQ96MY7 647 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 STARD7Q9NQZ5 370 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 IL17RBQ9NRM6 502 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 TACC3Q9Y6A5 838 aa15.82■□□□□ 0.12
NUP188-211ENST00000550219 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 LRRC37A2A6NM11 1700 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 ADCY6O43306 1168 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 C6orf222P0C671 652 aaPredicted RBP15.81■□□□□ 0.12
NUP188-211ENST00000550219 CHMLP26374 656 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 ACLYP53396 1101 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 CNTN2Q02246 1040 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
NUP188-211ENST00000550219 SHHQ15465 462 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 C9orf50Q5SZB4 431 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 MTMR10Q9NXD2 777 aa15.81■□□□□ 0.12
NUP188-211ENST00000550219 ZNF536O15090 1300 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 HIP1O00291 1037 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 FDX1P10109 184 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 HAND2P61296 217 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 CCDC144BQ3MJ40 725 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.8■□□□□ 0.12
NUP188-211ENST00000550219 ZNF589Q86UQ0 364 aaPredicted RBP15.8■□□□□ 0.12
NUP188-211ENST00000550219 TRERF1Q96PN7 1200 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
NUP188-211ENST00000550219 ANAPC4Q9UJX5 808 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 PRR12Q9ULL5 1215 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 SMCHD1A6NHR9 2005 aa15.8■□□□□ 0.12
NUP188-211ENST00000550219 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
NUP188-211ENST00000550219 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
NUP188-211ENST00000550219 CDC45O75419 566 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 RAG1P15918 1043 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 KCNA10Q16322 511 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 MCMDC2Q4G0Z9 681 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 RCSD1Q6JBY9 416 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
NUP188-211ENST00000550219 NUP133Q8WUM0 1156 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 VTI1AQ96AJ9 217 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
NUP188-211ENST00000550219 SPC25Q9HBM1 224 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 TMEM39AQ9NV64 488 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 CCPG1Q9ULG6 757 aa15.79■□□□□ 0.12
NUP188-211ENST00000550219 DDX49Q9Y6V7 483 aaKnown RBP15.79■□□□□ 0.12
NUP188-211ENST00000550219 MCM3APO60318 1980 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 CCDC171Q6TFL3 1326 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 ORC4O43929 436 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 FGAP02671 866 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 ITGB8P26012 769 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 SLC16A2P36021 539 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 TKFCQ3LXA3 575 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 MUM1L1Q5H9M0 696 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 ZNF697Q5TEC3 545 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 NSMFQ6X4W1 530 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 KLHDC9Q8NEP7 349 aa15.78■□□□□ 0.12
NUP188-211ENST00000550219 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms