RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 DDX19AQ9NUU7 478 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 UTYO14607 1347 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 KYAT1Q16773 422 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 NYAP2Q9P242 653 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 DAGLAQ9Y4D2 1042 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 RIOK3O14730 519 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 CAVIN2O95810 425 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 HOXA10P31260 410 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 CDC37Q16543 378 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 PROCA1Q8NCQ7 364 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 ZNF830Q96NB3 372 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 HAUS7Q99871 368 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 MED10Q9BTT4 135 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 GLIS2Q9BZE0 524 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 PUS3Q9BZE2 481 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 SLC12A6Q9UHW9 1150 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 INO80B-WBP1J3KQ70 363 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 STXBP3O00186 592 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 VIMP08670 466 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 NUCB1Q02818 461 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 PRR16Q569H4 304 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 CTU1Q7Z7A3 348 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 TMEM199Q8N511 208 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 SAMD3Q8N6K7 520 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 OR6J1Q8NGC5 347 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 TDRD7Q8NHU6 1098 aaKnown RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 ZKSCAN3Q9BRR0 538 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 USP44Q9H0E7 712 aa7.3□□□□□ -1.24
SMAD5-211ENST00000545279 FAM49AQ9H0Q0 323 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 RPAP3Q9H6T3 665 aaPredicted RBP7.3□□□□□ -1.24
SMAD5-211ENST00000545279 UNCXA6NJT0 531 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 DYNC1LI2O43237 492 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 SKIP12755 728 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 SFNP31947 248 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 FKBP1AP62942 108 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 SEPT7Q16181 437 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 FAM102BQ5T8I3 360 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 MAP3K20Q9NYL2 800 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ABCC12Q96J65 1359 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 OATP04181 439 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 PSMC4P43686 418 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CCDC14Q49A88 953 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ZNF654Q8IZM8 581 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 MCM7P33993 719 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 TXKP42681 527 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 LMAN1P49257 510 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CDK8P49336 464 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 DMP1Q13316 513 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CALCRLQ16602 461 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 FKBP1CQ5VVH2 108 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 GZF1Q9H116 711 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 LMCD1Q9NZU5 365 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ZBTB12Q9Y330 459 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 TXNP10599 105 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 PPIL2Q13356 520 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 PDZD4Q76G19 769 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 EEPD1Q7L9B9 569 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 MNS1Q8NEH6 495 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 GBP2P32456 591 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 MTMR2Q13614 643 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CUL4BQ13620 913 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 PIK3AP1Q6ZUJ8 805 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 NEK9Q8TD19 979 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CTAGE1Q96RT6 745 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 F8W8V4 182 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 CETN3O15182 167 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ADCY3O60266 1144 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 EFCAB14O75071 495 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 SLU7O95391 586 aaKnown RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 FAM83BQ5T0W9 1011 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 NEK8Q86SG6 692 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 TPH2Q8IWU9 490 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 THNSL1Q8IYQ7 743 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ZNF577Q9BSK1 485 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 ANO3Q9BYT9 981 aa7.29□□□□□ -1.24
SMAD5-211ENST00000545279 RRN3P2A6NIE6 340 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 EXOC3O60645 756 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 CD19P15391 556 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 MAP2K2P36507 400 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 GUCY1B3Q02153 619 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 ARMCX2Q7L311 632 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 C2orf40Q9H1Z8 148 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 LRRIQ4A6NIV6 560 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 CACNB3P54284 484 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 KIF23Q02241 960 aaPredicted RBP7.28□□□□□ -1.24
SMAD5-211ENST00000545279 TTC38Q5R3I4 469 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 CNNM4Q6P4Q7 775 aa7.28□□□□□ -1.24
SMAD5-211ENST00000545279 GPRC5DQ9NZD1 345 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms