RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 TRIM14Q14142 442 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 MEX3CQ5U5Q3 659 aaKnown RBP19.99■□□□□ 0.79
SCARB1-208ENST00000544327 CNGA4Q8IV77 575 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 ANKRD20A12PQ8NF67 263 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 RIOX1Q9H6W3 641 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 OGFRQ9NZT2 677 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 DAGLAQ9Y4D2 1042 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 PARP3Q9Y6F1 533 aa19.99■□□□□ 0.79
SCARB1-208ENST00000544327 KLRC4O43908 158 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 OR52Z1P0C646 297 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 PRCPP42785 496 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 GABPAQ06546 454 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 TCP11X2Q5H9J9 407 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 ARID3AQ99856 593 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 COA1Q9GZY4 146 aa19.98■□□□□ 0.79
SCARB1-208ENST00000544327 DDX41Q9UJV9 622 aaKnown RBP19.98■□□□□ 0.79
SCARB1-208ENST00000544327 IGKV6D-41A0A0C4DH26 115 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 SMCO2A6NFE2 343 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 RHOBTB3O94955 611 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 CCDC175P0C221 793 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 HMGB2P26583 209 aaKnown RBP19.97■□□□□ 0.79
SCARB1-208ENST00000544327 CDC25AP30304 524 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 KMT5BQ4FZB7 885 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 USP17L2Q6R6M4 530 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 GTPBP4Q9BZE4 634 aaKnown RBP19.97■□□□□ 0.79
SCARB1-208ENST00000544327 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
SCARB1-208ENST00000544327 GDAQ9Y2T3 454 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 MYO3BQ8WXR4 1341 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 ANKRD31Q8N7Z5 1873 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 NRXN2Q9P2S2 1712 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 KCNJ18B7U540 433 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 GYPCP04921 128 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 KCNJ12Q14500 433 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 NEK8Q86SG6 692 aa19.97■□□□□ 0.79
SCARB1-208ENST00000544327 PP2D1A8MPX8 630 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-208ENST00000544327 TPM1P09493 284 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 H2AFXP16104 143 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-208ENST00000544327 ASPRV1Q53RT3 343 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 SOGA3Q5TF21 947 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 KIFC2Q96AC6 838 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.96■□□□□ 0.797e-13■□□□□ 8.3
SCARB1-208ENST00000544327 ADGRG1Q9Y653 693 aa19.96■□□□□ 0.79
SCARB1-208ENST00000544327 V9GYY5 206 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-208ENST00000544327 C6orf229H3BNL8 230 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 N4BP3O15049 544 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 SNHG28P0DPA3 235 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 PDHBP11177 359 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 CASQ1P31415 396 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 MAP3K9P80192 1104 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 FBXO38Q6PIJ6 1188 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 RAD9BQ6WBX8 426 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 RASGRP2Q7LDG7 609 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 GIMAP8Q8ND71 665 aaPredicted RBP19.95■□□□□ 0.78
SCARB1-208ENST00000544327 NOC3LQ8WTT2 800 aaKnown RBP19.95■□□□□ 0.78
SCARB1-208ENST00000544327 THAP9Q9H5L6 903 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 MTMR4Q9NYA4 1195 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 SOWAHDA6NJG2 315 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 GNG11P61952 73 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 STIM1Q13586 685 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 CABP7Q86V35 215 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 LRRN4CLQ8ND94 238 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 PIGSQ96S52 555 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 C7orf25Q9BPX7 421 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 CPVLQ9H3G5 476 aa19.95■□□□□ 0.78
SCARB1-208ENST00000544327 USP17L5A8MUK1 530 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 TADA3O75528 432 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 URI1O94763 535 aaPredicted RBP19.94■□□□□ 0.78
SCARB1-208ENST00000544327 EEF1GP26641 437 aaKnown RBP19.94■□□□□ 0.78
SCARB1-208ENST00000544327 CASP14P31944 242 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 CCT6AP40227 531 aaKnown RBP19.94■□□□□ 0.78
SCARB1-208ENST00000544327 MTF1Q14872 753 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 ERCC6LQ2NKX8 1250 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 IRF2BP1Q8IU81 584 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 TMTC1Q8IUR5 882 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 RASSF8Q8NHQ8 419 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 LRRC15Q8TF66 581 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 DHTKD1Q96HY7 919 aaPredicted RBP19.94■□□□□ 0.78
SCARB1-208ENST00000544327 WDR24Q96S15 920 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 MRPL44Q9H9J2 332 aaKnown RBP19.94■□□□□ 0.78
SCARB1-208ENST00000544327 SWAP70Q9UH65 585 aa19.94■□□□□ 0.78
SCARB1-208ENST00000544327 MYH8P13535 1937 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 GREB1LQ9C091 1923 aaPredicted RBP19.93■□□□□ 0.78
SCARB1-208ENST00000544327 EFCAB8A8MWE9 144 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 PPP1R2P41236 205 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 FXR1P51114 621 aaKnown RBP eCLIP19.93■□□□□ 0.78
SCARB1-208ENST00000544327 GTF2IP78347 998 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 CBX1P83916 185 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 COBLL1Q53SF7 1204 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 REXO1Q8N1G1 1221 aaKnown RBP19.93■□□□□ 0.78
SCARB1-208ENST00000544327 DESI2Q9BSY9 194 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 FAM53CQ9NYF3 392 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 TAB2Q9NYJ8 693 aa19.93■□□□□ 0.78
SCARB1-208ENST00000544327 CCNT1O60563 726 aaKnown RBP19.92■□□□□ 0.78
SCARB1-208ENST00000544327 PLCG1P19174 1290 aa19.92■□□□□ 0.78
SCARB1-208ENST00000544327 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
SCARB1-208ENST00000544327 LETM2Q2VYF4 491 aa19.92■□□□□ 0.78
SCARB1-208ENST00000544327 PPP1R18Q6NYC8 613 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms