RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-217	ENST00000543449	LOC102724159	A0A0B4J2E5	919 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ASB14	A6NK59	587 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449		B4E1Z4	1266 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	KBTBD13	C9JR72	458 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	DNM1L	O00429	736 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ICAM1	P05362	532 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	SNHG28	P0DPA3	235 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	AKR1A1	P14550	325 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	SLC4A3	P48751	1232 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ZNF543	Q08ER8	600 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	PWP2	Q15269	919 aa	Known RBP	12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ASPRV1	Q53RT3	343 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	BMP2KL	Q5H9B9	411 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RALYL	Q86SE5	291 aa	Known RBP	12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	PNMA1	Q8ND90	353 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	TRERF1	Q96PN7	1200 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	MPHOSPH6	Q99547	160 aa	Known RBP	12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RANBP17	Q9H2T7	1088 aa	Known RBP	12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RNF146	Q9NTX7	359 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	CCPG1	Q9ULG6	757 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	MTMR7	Q9Y216	660 aa		12.05	□□□□□ -0.48
NPIPB4-217	ENST00000543449	POTEB2	H3BUK9	544 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	PGK2	P07205	417 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RARB	P10826	455 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ALAS1	P13196	640 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	TRAF1	Q13077	416 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	IFIT1B	Q5T764	474 aa	Known RBP	12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	NCOA7	Q8NI08	942 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	CCDC136	Q96JN2	1154 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	MTA3	Q9BTC8	594 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ABHD16B	Q9H3Z7	469 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ZSWIM5	Q9P217	1185 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	FAM184B	Q9ULE4	1060 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RIPK3	Q9Y572	518 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	TNKS	O95271	1327 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	WDR19	Q8NEZ3	1342 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	LAMA4	Q16363	1823 aa		12.04	□□□□□ -0.48
NPIPB4-217	ENST00000543449	COL11A1	P12107	1806 aa	Predicted RBP	12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449		B4DLN1	442 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	COL6A1	P12109	1028 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	MRPL12	P52815	198 aa	Known RBP	12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	CCDC174	Q6PII3	467 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	RNF180	Q86T96	592 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	MAP4K1	Q92918	833 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	AGBL1	Q96MI9	1066 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	SPC25	Q9HBM1	224 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ADD3	Q9UEY8	706 aa	Known RBP	12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449	ZNF536	O15090	1300 aa		12.03	□□□□□ -0.48
NPIPB4-217	ENST00000543449		H0YGN5	161 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CYP21A2	P08686	494 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	PARP1	P09874	1014 aa	Known RBP	12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	RNF20	Q5VTR2	975 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ENAH	Q8N8S7	591 aa	Predicted RBP	12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	TRPV1	Q8NER1	839 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	DIS3L	Q8TF46	1054 aa	Known RBP	12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ZKSCAN3	Q9BRR0	538 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	GPCPD1	Q9NPB8	672 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	A1CF	Q9NQ94	594 aa	Known RBP	12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	HOMER2	Q9NSB8	354 aa		12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.02	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	SLC16A2	P36021	539 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	MNX1	P50219	401 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ERICH6B	Q5W0A0	696 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	TTBK2	Q6IQ55	1244 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	TMTC2	Q8N394	836 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	FAM133A	Q8N9E0	248 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	RGS22	Q8NE09	1264 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ESYT1	Q9BSJ8	1104 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	TSEN34	Q9BSV6	310 aa	Known RBP	12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	XPNPEP3	Q9NQH7	507 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CYP39A1	Q9NYL5	469 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449	HTT	P42858	3142 aa		12.01	□□□□□ -0.49
NPIPB4-217	ENST00000543449		A0A1W2PPC1	479 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449		E7EWF7	191 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	IFIT3	O14879	490 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	DUSP11	O75319	330 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	PTH1R	Q03431	593 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ACVR2B	Q13705	512 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	WTAP	Q15007	396 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	PRAMEF19	Q5SWL8	479 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	NSMF	Q6X4W1	530 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ARMCX2	Q7L311	632 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	MCF2L2	Q86YR7	1114 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	SAMD3	Q8N6K7	520 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	PCSK9	Q8NBP7	692 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CHMP4C	Q96CF2	233 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	SENP6	Q9GZR1	1112 aa	Predicted RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	IL25	Q9H293	177 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ZHX1	Q9UKY1	873 aa	Predicted RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	RBM8A	Q9Y5S9	174 aa	Known RBP	12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	ABCB11	O95342	1321 aa		12	□□□□□ -0.49
NPIPB4-217	ENST00000543449	MOXD2P	A6NHM9	499 aa		11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	DHX16	O60231	1041 aa	Known RBP	11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CDC45	O75419	566 aa		11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	SNAI1	O95863	264 aa	Predicted RBP	11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	CACNB1	Q02641	598 aa	Predicted RBP	11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	LRRC41	Q15345	812 aa		11.99	□□□□□ -0.49
NPIPB4-217	ENST00000543449	SEC23A	Q15436	765 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms