RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 STX8Q9UNK0 236 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 ESYT2A0FGR8 921 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 KLRG2A4D1S0 409 aaPredicted RBP7.39□□□□□ -1.23
PTPRO-208ENST00000542557 PARP1P09874 1014 aaKnown RBP7.39□□□□□ -1.23
PTPRO-208ENST00000542557 NAALADL2Q58DX5 795 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 FAM182BQ5T319 152 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 RRAGBQ5VZM2 374 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 TOGARAM2Q6ZUX3 1019 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 RASGRP4Q8TDF6 673 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
PTPRO-208ENST00000542557 CRAMP1Q96RY5 1269 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 PARP3Q9Y6F1 533 aa7.39□□□□□ -1.23
PTPRO-208ENST00000542557 KLRF2D3W0D1 207 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 FANCGO15287 622 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 SERPINB2P05120 415 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 CCDC175P0C221 793 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 H2AFXP16104 143 aaPredicted RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 GNA11P29992 359 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 KARSQ15046 597 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 KRT31Q15323 416 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 KMT5BQ4FZB7 885 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 SLC27A3Q5K4L6 730 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 ADSSL1Q8N142 457 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 TBC1D16Q8TBP0 767 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 NELFBQ8WX92 580 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 GPR101Q96P66 508 aaPredicted RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 GTPBP4Q9BZE4 634 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 TMEM60Q9H2L4 133 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 C6orf50Q9HD87 102 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 KBTBD4Q9NVX7 518 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 SAP30BPQ9UHR5 308 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 MYO3BQ8WXR4 1341 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 H7C1D1 291 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 RHOBTB3O94955 611 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 TPM1P09493 284 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 UBA7P41226 1012 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 RBL2Q08999 1139 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 NONOQ15233 471 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 INF2Q27J81 1249 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 TCP11X2Q5H9J9 407 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 FBXO38Q6PIJ6 1188 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 STAMQ92783 540 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 EFCAB8A8MWE9 144 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 TADA3O75528 432 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 GYPCP04921 128 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 OR52Z1P0C646 297 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 COPB1P53618 953 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 NAPAP54920 295 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 KIFC2Q96AC6 838 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 SEC63Q9UGP8 760 aaKnown RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 ADGRG1Q9Y653 693 aa7.38□□□□□ -1.23
PTPRO-208ENST00000542557 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
PTPRO-208ENST00000542557 NRXN2Q9P2S2 1712 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 KCNJ18B7U540 433 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 N4BP3O15049 544 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 KLRC4O43908 158 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 URI1O94763 535 aaPredicted RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 HMGB2P26583 209 aaKnown RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 CASQ1P31415 396 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 PPP1R2P41236 205 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 PRCPP42785 496 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GNG11P61952 73 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 STIM1Q13586 685 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 KCNJ12Q14500 433 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 RASGRP2Q7LDG7 609 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 NEK8Q86SG6 692 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 NOC3LQ8WTT2 800 aaKnown RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 CEP95Q96GE4 821 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 THAP9Q9H5L6 903 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 RIOX1Q9H6W3 641 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 FAM53CQ9NYF3 392 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 POLLQ9UGP5 575 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 MYH8P13535 1937 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GREB1LQ9C091 1923 aaPredicted RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 A0A1W2PQC6 194 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 SOWAHDA6NJG2 315 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GOLGA8HP0CJ92 632 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 SNHG28P0DPA3 235 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 EEF1GP26641 437 aaKnown RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 CASP14P31944 242 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 MAP3K9P80192 1104 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 CBX1P83916 185 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GABPAQ06546 454 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 ERCC6LQ2NKX8 1250 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 COBLL1Q53SF7 1204 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 TMTC1Q8IUR5 882 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GIMAP8Q8ND71 665 aaPredicted RBP7.37□□□□□ -1.23
PTPRO-208ENST00000542557 LRRN4CLQ8ND94 238 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 MNS1Q8NEH6 495 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 GDAQ9Y2T3 454 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 DAGLAQ9Y4D2 1042 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 ANKRD31Q8N7Z5 1873 aa7.37□□□□□ -1.23
PTPRO-208ENST00000542557 IGKV6D-41A0A0C4DH26 115 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 524.8 ms