RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 IKQ13123 557 aaPredicted RBP16.76■□□□□ 0.27
SNHG1-213ENST00000540725 ACVR2BQ13705 512 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 KLHDC9Q8NEP7 349 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 CHURC1Q8WUH1 139 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 ABHD16BQ9H3Z7 469 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 STX8Q9UNK0 236 aa16.76■□□□□ 0.27
SNHG1-213ENST00000540725 LRRC37A2A6NM11 1700 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 LCTP09848 1927 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 ITGB8P26012 769 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 ARMCX2Q7L311 632 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 INCENPQ9NQS7 918 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 STARD7Q9NQZ5 370 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
SNHG1-213ENST00000540725 ZNF536O15090 1300 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 KIAA0355O15063 1070 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 ADCY6O43306 1168 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 NMT2O60551 498 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 CNTN2Q02246 1040 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 KCNA10Q16322 511 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 CCSAPQ6IQ19 270 aaPredicted RBP16.74■□□□□ 0.27
SNHG1-213ENST00000540725 KCTD1Q719H9 257 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 GUCD1Q96NT3 240 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 A1CFQ9NQ94 594 aaKnown RBP16.74■□□□□ 0.27
SNHG1-213ENST00000540725 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 MYO9BQ13459 2157 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 UNC80Q8N2C7 3258 aa16.74■□□□□ 0.27
SNHG1-213ENST00000540725 RANBP6O60518 1105 aaKnown RBP16.73■□□□□ 0.27
SNHG1-213ENST00000540725 PLA2G6O60733 806 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
SNHG1-213ENST00000540725 RAG1P15918 1043 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 CST5P28325 142 aaPredicted RBP16.73■□□□□ 0.27
SNHG1-213ENST00000540725 PDE1AP54750 535 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 IRX5P78411 483 aaPredicted RBP16.73■□□□□ 0.27
SNHG1-213ENST00000540725 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 ZNF697Q5TEC3 545 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 RCSD1Q6JBY9 416 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 RASGRP2Q7LDG7 609 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 ANKRD33Q7Z3H0 272 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 FAM161BQ96MY7 647 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 TOX2Q96NM4 488 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
SNHG1-213ENST00000540725 SPC25Q9HBM1 224 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 TMEM39AQ9NV64 488 aa16.73■□□□□ 0.27
SNHG1-213ENST00000540725 DCDC2CA8MYV0 355 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 DLL1O00548 723 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 ORC4O43929 436 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 ALAS1P13196 640 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 FAAP100Q0VG06 881 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
SNHG1-213ENST00000540725 ALX1Q15699 326 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 CCDC174Q6PII3 467 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 PCSK9Q8NBP7 692 aaKnown RBP16.72■□□□□ 0.27
SNHG1-213ENST00000540725 GLT1D1Q96MS3 346 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 MTMR7Q9Y216 660 aa16.72■□□□□ 0.27
SNHG1-213ENST00000540725 ELP1O95163 1332 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 ASGR1P07306 291 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 EPHB4P54760 987 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 GJA9P57773 515 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 SNAP25P60880 206 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 FAM227BQ96M60 508 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 PRR12Q9ULL5 1215 aa16.71■□□□□ 0.27
SNHG1-213ENST00000540725 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 SOWAHBA6NEL2 793 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 FGRP09769 529 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 NOVP48745 357 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
SNHG1-213ENST00000540725 FPGSQ05932 587 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 GNASQ5JWF2 1037 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 TOMM22Q9NS69 142 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 CDH23Q9H251 3354 aa16.7■□□□□ 0.26
SNHG1-213ENST00000540725 MROH7Q68CQ1 1323 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 ASB14A6NK59 587 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 FGAP02671 866 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 MUM1L1Q5H9M0 696 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 RNPC3Q96LT9 517 aaKnown RBP16.69■□□□□ 0.26
SNHG1-213ENST00000540725 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 CCPG1Q9ULG6 757 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 ASTN1O14525 1302 aa16.69■□□□□ 0.26
SNHG1-213ENST00000540725 A0A0U1RQG5 324 aaPredicted RBP16.68■□□□□ 0.26
SNHG1-213ENST00000540725 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms