RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CTAGE5O15320 804 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 ASGR1P07306 291 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 KLRC3Q07444 240 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 SMC5Q8IY18 1101 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 EPB41L4AQ9HCS5 686 aaPredicted RBP17.83■□□□□ 0.44
USB1-203ENST00000539737 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 ASTN1O14525 1302 aa17.82■□□□□ 0.44
USB1-203ENST00000539737 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
USB1-203ENST00000539737 ACVR2BQ13705 512 aa17.82■□□□□ 0.44
USB1-203ENST00000539737 PPP1R13LQ8WUF5 828 aa17.82■□□□□ 0.44
USB1-203ENST00000539737 CDK7P50613 346 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 OSBP2Q969R2 916 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 PURBQ96QR8 312 aaKnown RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 KATNBL1Q9H079 304 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
USB1-203ENST00000539737 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 YBX2Q9Y2T7 364 aaKnown RBP17.81■□□□□ 0.44
USB1-203ENST00000539737 XIRP2A4UGR9 3374 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 M0R2C6 588 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 ERC2O15083 957 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
USB1-203ENST00000539737 MYOGP15173 224 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 MX1P20591 662 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 RABGGTBP53611 331 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 TJAP1Q5JTD0 557 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 CXCL17Q6UXB2 119 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 FAM126BQ8IXS8 530 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 GLT1D1Q96MS3 346 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 LRRC37A2A6NM11 1700 aa17.8■□□□□ 0.44
USB1-203ENST00000539737 TCF20Q9UGU0 1960 aaKnown RBP17.79■□□□□ 0.44
USB1-203ENST00000539737 IGKV6D-41A0A0C4DH26 115 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 IGHDP01880 384 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 COL9A1P20849 921 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 IGFBP4P22692 258 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 CCL23P55773 120 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 PSMC6P62333 389 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 GNASQ5JWF2 1037 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
USB1-203ENST00000539737 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
USB1-203ENST00000539737 TMEM265A0A087WTH1 108 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 ARVCFO00192 962 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 RASIP1Q5U651 963 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 AGBL1Q96MI9 1066 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
USB1-203ENST00000539737 UPF3AQ9H1J1 476 aaKnown RBP17.78■□□□□ 0.44
USB1-203ENST00000539737 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 PDGFCQ9NRA1 345 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 BDP1A6H8Y1 2624 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 NCOR1O75376 2440 aa17.78■□□□□ 0.44
USB1-203ENST00000539737 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 LCTP09848 1927 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
USB1-203ENST00000539737 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 ZBED4O75132 1171 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.44
USB1-203ENST00000539737 GJA9P57773 515 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 PPIGQ13427 754 aaKnown RBP eCLIP17.77■□□□□ 0.445e-7■□□□□ 10.1
USB1-203ENST00000539737 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
USB1-203ENST00000539737 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
USB1-203ENST00000539737 TRPV6Q9H1D0 765 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 SLC38A10Q9HBR0 1119 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
USB1-203ENST00000539737 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.44
USB1-203ENST00000539737 NEFLP07196 543 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 COPB2P35606 906 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 NUCB1Q02818 461 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 LRRFIP1Q32MZ4 808 aaKnown RBP17.76■□□□□ 0.43
USB1-203ENST00000539737 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 CCDC174Q6PII3 467 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 OTUD7AQ8TE49 926 aaPredicted RBP17.76■□□□□ 0.43
USB1-203ENST00000539737 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
USB1-203ENST00000539737 SCLYQ96I15 445 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms