RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 SYNPO2Q9UMS6 1093 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 MTMR7Q9Y216 660 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
PDCD2-207ENST00000539212 ZNF536O15090 1300 aa20.49■□□□□ 0.87
PDCD2-207ENST00000539212 A0A0C4DFX4 3053 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 POTEB2H3BUK9 544 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 SLC3A2P08195 630 aaKnown RBP20.48■□□□□ 0.87
PDCD2-207ENST00000539212 MCCP23508 829 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 ACLYP53396 1101 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
PDCD2-207ENST00000539212 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
PDCD2-207ENST00000539212 STX8Q9UNK0 236 aa20.48■□□□□ 0.87
PDCD2-207ENST00000539212 TSPY2A6NKD2 308 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 SLC1A4P43007 532 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 STAT2P52630 851 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 OAZ1P54368 228 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 KCNA10Q16322 511 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 CCSAPQ6IQ19 270 aaPredicted RBP20.47■□□□□ 0.87
PDCD2-207ENST00000539212 CCDC174Q6PII3 467 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.873e-10■□□□□ 10
PDCD2-207ENST00000539212 ZNF467Q7Z7K2 595 aaPredicted RBP20.47■□□□□ 0.87
PDCD2-207ENST00000539212 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 CHST13Q8NET6 341 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 GMCL1Q96IK5 515 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 STARD7Q9NQZ5 370 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
PDCD2-207ENST00000539212 DLL1O00548 723 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 PTGS1P23219 599 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 FAM227BQ96M60 508 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 KATNBL1Q9H079 304 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 ACAD9Q9H845 621 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 A1CFQ9NQ94 594 aaKnown RBP20.46■□□□□ 0.87
PDCD2-207ENST00000539212 FBXO40Q9UH90 709 aa20.46■□□□□ 0.87
PDCD2-207ENST00000539212 A0A0D9SFI3 127 aa20.45■□□□□ 0.86
PDCD2-207ENST00000539212 DUSP11O75319 330 aaKnown RBP20.45■□□□□ 0.86
PDCD2-207ENST00000539212 C6orf222P0C671 652 aaPredicted RBP20.45■□□□□ 0.86
PDCD2-207ENST00000539212 FAAP100Q0VG06 881 aa20.45■□□□□ 0.86
PDCD2-207ENST00000539212 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
PDCD2-207ENST00000539212 LAMA4Q16363 1823 aa20.45■□□□□ 0.86
PDCD2-207ENST00000539212 ASTN1O14525 1302 aa20.45■□□□□ 0.86
PDCD2-207ENST00000539212 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.44■□□□□ 0.86
PDCD2-207ENST00000539212 SOWAHBA6NEL2 793 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 KIAA0355O15063 1070 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 RANBP6O60518 1105 aaKnown RBP20.44■□□□□ 0.86
PDCD2-207ENST00000539212 ALAS1P13196 640 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 PDE1AP54750 535 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 ZNF697Q5TEC3 545 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 FAM160B2Q86V87 743 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 EVI5LQ96CN4 794 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 TSEN34Q9BSV6 310 aaKnown RBP20.44■□□□□ 0.86
PDCD2-207ENST00000539212 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
PDCD2-207ENST00000539212 MOXD2PA6NHM9 499 aa20.43■□□□□ 0.86
PDCD2-207ENST00000539212 RAG1P15918 1043 aa20.43■□□□□ 0.86
PDCD2-207ENST00000539212 FAM109BQ6ICB4 259 aaPredicted RBP20.43■□□□□ 0.86
PDCD2-207ENST00000539212 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
PDCD2-207ENST00000539212 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
PDCD2-207ENST00000539212 UPF3AQ9H1J1 476 aaKnown RBP20.43■□□□□ 0.86
PDCD2-207ENST00000539212 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
PDCD2-207ENST00000539212 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
PDCD2-207ENST00000539212 CTAGE5O15320 804 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 ASGR1P07306 291 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 CST5P28325 142 aaPredicted RBP20.42■□□□□ 0.86
PDCD2-207ENST00000539212 BEX3Q00994 111 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 RRP12Q5JTH9 1297 aaKnown RBP20.42■□□□□ 0.86
PDCD2-207ENST00000539212 TTBK2Q6IQ55 1244 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 ANKRD33Q7Z3H0 272 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 ZNF589Q86UQ0 364 aaPredicted RBP20.42■□□□□ 0.86
PDCD2-207ENST00000539212 CHURC1Q8WUH1 139 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 NUP133Q8WUM0 1156 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 TOMM22Q9NS69 142 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 ANAPC4Q9UJX5 808 aa20.42■□□□□ 0.86
PDCD2-207ENST00000539212 PRUNE2Q8WUY3 3088 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 GJA9P57773 515 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 FPGSQ05932 587 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
PDCD2-207ENST00000539212 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
PDCD2-207ENST00000539212 TMEM63BQ5T3F8 832 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
PDCD2-207ENST00000539212 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 TTYH1Q9H313 450 aaPredicted RBP20.41■□□□□ 0.86
PDCD2-207ENST00000539212 HELLSQ9NRZ9 838 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
PDCD2-207ENST00000539212 GBF1Q92538 1859 aa20.41■□□□□ 0.86
PDCD2-207ENST00000539212 ORC4O43929 436 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 FDX1P10109 184 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 SLC16A2P36021 539 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 NOVP48745 357 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 HAND2P61296 217 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 GNASQ5JWF2 1037 aa20.4■□□□□ 0.86
PDCD2-207ENST00000539212 EEPD1Q7L9B9 569 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms