RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 RALYLQ86SE5 291 aaKnown RBP20.3■□□□□ 0.84
GPN3-202ENST00000537466 U2AF1L4Q8WU68 220 aaKnown RBP20.3■□□□□ 0.84
GPN3-202ENST00000537466 HMX1Q9NP08 348 aaPredicted RBP20.3■□□□□ 0.84
GPN3-202ENST00000537466 LCTP09848 1927 aa20.3■□□□□ 0.84
GPN3-202ENST00000537466 SGPL1O95470 568 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
GPN3-202ENST00000537466 CYP2C19P33261 490 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 ANTXR2P58335 489 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
GPN3-202ENST00000537466 IFIT1BQ5T764 474 aaKnown RBP20.29■□□□□ 0.84
GPN3-202ENST00000537466 MB21D2Q8IYB1 491 aaPredicted RBP20.29■□□□□ 0.84
GPN3-202ENST00000537466 RANBP17Q9H2T7 1088 aaKnown RBP20.29■□□□□ 0.84
GPN3-202ENST00000537466 CPVLQ9H3G5 476 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 SENP2Q9HC62 589 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
GPN3-202ENST00000537466 CCND3P30281 292 aaPredicted RBP20.28■□□□□ 0.84
GPN3-202ENST00000537466 MAML3Q96JK9 1138 aa20.28■□□□□ 0.84
GPN3-202ENST00000537466 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
GPN3-202ENST00000537466 ZNF792Q3KQV3 632 aa20.27■□□□□ 0.84
GPN3-202ENST00000537466 GPATCH4Q5T3I0 446 aaKnown RBP20.27■□□□□ 0.84
GPN3-202ENST00000537466 MFSD14CQ5VZR4 134 aa20.27■□□□□ 0.84
GPN3-202ENST00000537466 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
GPN3-202ENST00000537466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.27■□□□□ 0.84
GPN3-202ENST00000537466 CHST13Q8NET6 341 aa20.27■□□□□ 0.84
GPN3-202ENST00000537466 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
GPN3-202ENST00000537466 ALAS1P13196 640 aa20.26■□□□□ 0.83
GPN3-202ENST00000537466 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
GPN3-202ENST00000537466 RNF146Q9NTX7 359 aa20.26■□□□□ 0.83
GPN3-202ENST00000537466 ICAM1P05362 532 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 TRPV1Q8NER1 839 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 TRERF1Q96PN7 1200 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 CRISPLD2Q9H0B8 497 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 ACAD9Q9H845 621 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 CCPG1Q9ULG6 757 aa20.25■□□□□ 0.83
GPN3-202ENST00000537466 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 TFRCP02786 760 aaKnown RBP20.24■□□□□ 0.83
GPN3-202ENST00000537466 WTAPQ15007 396 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 ASPRV1Q53RT3 343 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 ANKRD35Q8N283 1001 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 DIS3Q9Y2L1 958 aaKnown RBP20.24■□□□□ 0.83
GPN3-202ENST00000537466 PDE4DIPQ5VU43 2346 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 ERICH2A1L162 156 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
GPN3-202ENST00000537466 CYBAP13498 195 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 TKFCQ3LXA3 575 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 STAG2Q8N3U4 1231 aa20.24■□□□□ 0.83
GPN3-202ENST00000537466 GPHNQ9NQX3 736 aaPredicted RBP20.24■□□□□ 0.83
GPN3-202ENST00000537466 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
GPN3-202ENST00000537466 PRC1O43663 620 aa20.23■□□□□ 0.83
GPN3-202ENST00000537466 SART3Q15020 963 aaKnown RBP20.23■□□□□ 0.83
GPN3-202ENST00000537466 PRAMEF19Q5SWL8 479 aa20.23■□□□□ 0.83
GPN3-202ENST00000537466 LHX8Q68G74 356 aa20.23■□□□□ 0.83
GPN3-202ENST00000537466 UBE2Q1Q7Z7E8 422 aa20.23■□□□□ 0.83
GPN3-202ENST00000537466 RASEFQ8IZ41 740 aa20.23■□□□□ 0.83
GPN3-202ENST00000537466 A1CFQ9NQ94 594 aaKnown RBP20.23■□□□□ 0.83
GPN3-202ENST00000537466 ALPK3Q96L96 1907 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 CNGA1P29973 690 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 RNF20Q5VTR2 975 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 FGD4Q96M96 766 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 TINF2Q9BSI4 451 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 LY9Q9HBG7 655 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 MAD2L2Q9UI95 211 aa20.22■□□□□ 0.83
GPN3-202ENST00000537466 MCM5P33992 734 aa20.21■□□□□ 0.83
GPN3-202ENST00000537466 OGDHLQ9ULD0 1010 aa20.21■□□□□ 0.83
GPN3-202ENST00000537466 LRRC37A2A6NM11 1700 aa20.21■□□□□ 0.83
GPN3-202ENST00000537466 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
GPN3-202ENST00000537466 FARP2O94887 1054 aaPredicted RBP20.2■□□□□ 0.82
GPN3-202ENST00000537466 CNTN2Q02246 1040 aa20.2■□□□□ 0.82
GPN3-202ENST00000537466 TROAPQ12815 778 aa20.2■□□□□ 0.82
GPN3-202ENST00000537466 GRM4Q14833 912 aa20.2■□□□□ 0.82
GPN3-202ENST00000537466 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
GPN3-202ENST00000537466 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
GPN3-202ENST00000537466 DIS3LQ8TF46 1054 aaKnown RBP20.2■□□□□ 0.82
GPN3-202ENST00000537466 LRRC2Q9BYS8 371 aa20.2■□□□□ 0.82
GPN3-202ENST00000537466 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 NFIBO00712 420 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
GPN3-202ENST00000537466 MNX1P50219 401 aaPredicted RBP20.19■□□□□ 0.82
GPN3-202ENST00000537466 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 MTA3Q9BTC8 594 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 VAT1LQ9HCJ6 419 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 CYP39A1Q9NYL5 469 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
GPN3-202ENST00000537466 WDR19Q8NEZ3 1342 aa20.19■□□□□ 0.82
GPN3-202ENST00000537466 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 SLC35G1Q2M3R5 365 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 USH1GQ495M9 461 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 NSMFQ6X4W1 530 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 CLEC4DQ8WXI8 215 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms