RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CCDC174Q6PII3 467 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 TMEM179Q6ZVK1 233 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 TMCO2Q7Z6W1 182 aaPredicted RBP6.35□□□□□ -1.39
CHD4-205ENST00000536301 LCORLQ8N3X6 602 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 ARNTL2Q8WYA1 636 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 EAF2Q96CJ1 260 aaPredicted RBP6.35□□□□□ -1.39
CHD4-205ENST00000536301 ZNF512BQ96KM6 892 aaPredicted RBP6.35□□□□□ -1.39
CHD4-205ENST00000536301 AGBL1Q96MI9 1066 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 API5Q9BZZ5 524 aaKnown RBP6.35□□□□□ -1.39
CHD4-205ENST00000536301 C1orf115Q9H7X2 142 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 MCM9Q9NXL9 1143 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 CFAP54Q96N23 3096 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 CACNA1HO95180 2353 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 MYH4Q9Y623 1939 aa6.35□□□□□ -1.39
CHD4-205ENST00000536301 PTPRZ1P23471 2315 aaPredicted RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 USP34Q70CQ2 3546 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 LCHNA4D1U4 455 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 TLR3O15455 904 aaKnown RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 BCAR3O75815 825 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 GNAI3P08754 354 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 EEF2P13639 858 aaKnown RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 IL9P15248 144 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 CNTN2Q02246 1040 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 ITGA7Q13683 1181 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 POLA2Q14181 598 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 SNRNP48Q6IEG0 339 aaKnown RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 MAMDC4Q6UXC1 1216 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 ARMCX2Q7L311 632 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 DEFB128Q7Z7B8 93 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 GDPD5Q8WTR4 605 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 FBXL18Q96ME1 805 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD4-205ENST00000536301 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
CHD4-205ENST00000536301 GPR108Q9NPR9 543 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 COG5Q9UP83 839 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 TANC1Q9C0D5 1861 aa6.34□□□□□ -1.39
CHD4-205ENST00000536301 SCN10AQ9Y5Y9 1956 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 ATG2AQ2TAZ0 1938 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 MAGEB6P1A0A0J9YX57 407 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 TCRBV5S4A2TA0A5A2 114 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 PRR33A8MZF0 331 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 GTPBP6O43824 516 aaPredicted RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 RAD21O60216 631 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 GNAI2P04899 355 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 PDE6AP16499 860 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 CDK8P49336 464 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 RARSP54136 660 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 NKX3-2P78367 333 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 TMEM67Q5HYA8 995 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 CCDC144CPQ8IYA2 1237 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 TRMT2AQ8IZ69 625 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 CPXCR1Q8N123 301 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 PCSK9Q8NBP7 692 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 HLA-CQ95604 372 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 UIMC1Q96RL1 719 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 MTIF3Q9H2K0 278 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 ARMT1Q9H993 441 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 ARHGEF10LQ9HCE6 1279 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 RAVER2Q9HCJ3 691 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 PDGFCQ9NRA1 345 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 TRMT13Q9NUP7 481 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 GNEQ9Y223 722 aaKnown RBP6.33□□□□□ -1.4
CHD4-205ENST00000536301 SPTBN4Q9H254 2564 aa6.33□□□□□ -1.4
CHD4-205ENST00000536301 SIP14410 1827 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 ZNF532Q9HCE3 1301 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 SOWAHBA6NEL2 793 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 DYNC1LI2O43237 492 aaPredicted RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 SURF6O75683 361 aaKnown RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 TRIM27P14373 513 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 SMPD1P17405 629 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 OS9Q13438 667 aaPredicted RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 TCTN1Q2MV58 587 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 ZNF467Q7Z7K2 595 aaPredicted RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 TLK2Q86UE8 772 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 FAM178BQ8IXR5 827 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 GJD3Q8N144 294 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 MSL3Q8N5Y2 521 aaKnown RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 CLUAP1Q96AJ1 413 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 PURBQ96QR8 312 aaKnown RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 TEX13BQ9BXU2 312 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 CRNKL1Q9BZJ0 848 aaKnown RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 ABHD16BQ9H3Z7 469 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 UBE2ZQ9H832 354 aaPredicted RBP6.32□□□□□ -1.4
CHD4-205ENST00000536301 SPC25Q9HBM1 224 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 HDAC5Q9UQL6 1122 aa6.32□□□□□ -1.4
CHD4-205ENST00000536301 MYH7P12883 1935 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 CACNA1AO00555 2505 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 NDUFB10O96000 172 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 ATP8B2P98198 1209 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 TNFAIP2Q03169 654 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 FSCN1Q16658 493 aaKnown RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 C12orf60Q5U649 245 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 C16orf86Q6ZW13 317 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms