RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 CST5P28325 142 aaPredicted RBP9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 TFAP4Q01664 338 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 PPARAQ07869 468 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 TKFCQ3LXA3 575 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 CCDC174Q6PII3 467 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 TICAM2Q86XR7 235 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 KLHDC9Q8NEP7 349 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 TRIM43Q96BQ3 446 aaPredicted RBP9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 RAVER2Q9HCJ3 691 aaKnown RBP9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.82
RPUSD4-209ENST00000534393 ASB14A6NK59 587 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 TMEM232C9JQI7 657 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 PQBP1O60828 265 aaKnown RBP9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 C6orf222P0C671 652 aaPredicted RBP9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 MX1P20591 662 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 SLC1A4P43007 532 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 FPGSQ05932 587 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 IKQ13123 557 aaPredicted RBP9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 KCNA10Q16322 511 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 CCDC144BQ3MJ40 725 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 LRRC47Q8N1G4 583 aaKnown RBP9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 STAG1Q8WVM7 1258 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 GUCD1Q96NT3 240 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 SEZ6LQ9BYH1 1024 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 ACAD9Q9H845 621 aa9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
RPUSD4-209ENST00000534393 TSPY2A6NKD2 308 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 GJA9P57773 515 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 FAAP100Q0VG06 881 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 GNASQ5JWF2 1037 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 CCSAPQ6IQ19 270 aaPredicted RBP9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 CCDC129Q6ZRS4 1044 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 ARMCX2Q7L311 632 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 VTI1AQ96AJ9 217 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 EVI5LQ96CN4 794 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 FAM161BQ96MY7 647 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 UPF3AQ9H1J1 476 aaKnown RBP9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 SEMA6BQ9H3T3 888 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 STX8Q9UNK0 236 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 MYH6P13533 1939 aa9.94□□□□□ -0.82
RPUSD4-209ENST00000534393 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 TLR3O15455 904 aaKnown RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 CABYRO75952 493 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 TIMP1P01033 207 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 ASGR1P07306 291 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 MCCP23508 829 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 CDK7P50613 346 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 NKX3-2P78367 333 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 TNFAIP2Q03169 654 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 FAM133AQ8N9E0 248 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 LENG1Q96BZ8 264 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 CDX2Q99626 313 aaPredicted RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 A1CFQ9NQ94 594 aaKnown RBP9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 HELLSQ9NRZ9 838 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 HOMER2Q9NSB8 354 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 RNF146Q9NTX7 359 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 ANAPC4Q9UJX5 808 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
RPUSD4-209ENST00000534393 CDH23Q9H251 3354 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 LOC102724159A0A0B4J2E5 919 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ARVCFO00192 962 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ORC4O43929 436 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ZEB2O60315 1214 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 PCP11498 1178 aaKnown RBP9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ALAS1P13196 640 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ITGB8P26012 769 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 PPIGQ13427 754 aaKnown RBP eCLIP9.92□□□□□ -0.825e-7■□□□□ 8.2
RPUSD4-209ENST00000534393 PWP2Q15269 919 aaKnown RBP9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ALX1Q15699 326 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ANKRD45Q5TZF3 282 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 IQSEC1Q6DN90 963 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 TMEM199Q8N511 208 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 DCAF4Q8WV16 495 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 CCDC136Q96JN2 1154 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 FGD4Q96M96 766 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 AP5M1Q9H0R1 490 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 TBX21Q9UL17 535 aa9.92□□□□□ -0.82
RPUSD4-209ENST00000534393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms