RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 WNK3Q9BYP7 1800 aa17.95■□□□□ 0.46
ATP2C1-224ENST00000533801 GNA11P29992 359 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 TEKT1Q969V4 418 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 GSDMAQ96QA5 445 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 SRRTQ9BXP5 876 aaKnown RBP17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 PALM3A6NDB9 673 aaPredicted RBP17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 SLC39A2Q9NP94 309 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 TNRC6CQ9HCJ0 1690 aaKnown RBP17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 PPP1R3GB7ZBB8 358 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
ATP2C1-224ENST00000533801 OR52Z1P0C646 297 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 IL1R1P14778 569 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 KRT31Q15323 416 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 KMT5BQ4FZB7 885 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 CDC42EP5Q6NZY7 148 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 NEK8Q86SG6 692 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 FAM170AA1A519 330 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L15C9J2P7 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L13C9JLJ4 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L11C9JVI0 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L18D6R9N7 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L22D6RA61 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L17D6RBQ6 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L19D6RCP7 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L20D6RJB6 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 GTPBP6O43824 516 aaPredicted RBP17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 PDHBP11177 359 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L24Q0WX57 530 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 USP17L6PQ6QN14 398 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 NYAP1Q6ZVC0 841 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 MAGEC2Q9UBF1 373 aaPredicted RBP17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 KCNJ18B7U540 433 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 FCER1AP12319 257 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 KCNJ12Q14500 433 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 EXOC1Q9NV70 894 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
ATP2C1-224ENST00000533801 ARAP2Q8WZ64 1704 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 IRS2Q9Y4H2 1338 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 AOC3Q16853 763 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 TC2NQ8N9U0 490 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 CARD6Q9BX69 1037 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 MTMR4Q9NYA4 1195 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 NID2Q14112 1375 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 SLU7O95391 586 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 SRGNP10124 158 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 ADCY7P51828 1080 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 PMS1P54277 932 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 LRRC41Q15345 812 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 CALCRLQ16602 461 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 TEX35Q5T0J7 233 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 PDXDC2PQ6P474 469 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 LONP1P36776 959 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 TRAPPC10P48553 1259 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 ACRBPQ8NEB7 543 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 LRWD1Q9UFC0 647 aa17.92■□□□□ 0.46
ATP2C1-224ENST00000533801 ZSCAN12O43309 604 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 SLC1A4P43007 532 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 STIM1Q13586 685 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 ZNF18P17022 549 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 CRKP46108 304 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 WDR24Q96S15 920 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 TFR2Q9UP52 801 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 PDS5AQ29RF7 1337 aaKnown RBP17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 CASQ1P31415 396 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 MCM6Q14566 821 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 KRT25Q7Z3Z0 450 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 CALML4Q96GE6 196 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 MAP7D2Q96T17 732 aa17.91■□□□□ 0.46
ATP2C1-224ENST00000533801 FXR1P51114 621 aaKnown RBP eCLIP17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 ETF1P62495 437 aaKnown RBP17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 E2F4Q16254 413 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 ADGRF4Q8IZF3 695 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 SLF1Q9BQI6 1058 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 SLC37A4O43826 429 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 ARHGAP29Q52LW3 1261 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 CSGALNACT2Q8N6G5 542 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 TANGO6Q9C0B7 1094 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 KRT9P35527 623 aa17.9■□□□□ 0.46
ATP2C1-224ENST00000533801 CCDC47Q96A33 483 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms