RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ADCY6O43306 1168 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 RAD21O60216 631 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 PFKMP08237 780 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 ADD2P35612 726 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 OAZ1P54368 228 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 ARMCX2Q7L311 632 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
CAPN1-223ENST00000533079 CHST13Q8NET6 341 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 SYNPO2Q9UMS6 1093 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 YBX2Q9Y2T7 364 aaKnown RBP14.92□□□□□ -0.02
CAPN1-223ENST00000533079 CTDP1Q9Y5B0 961 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-223ENST00000533079 PCDHA11Q9Y5I1 949 aa14.92□□□□□ -0.02
CAPN1-223ENST00000533079 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 USP17L21D6R901 530 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 ERC2O15083 957 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 ZBED4O75132 1171 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 BMP1P13497 986 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 CYP2C18P33260 490 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 RPUSD2Q8IZ73 545 aaKnown RBP14.91□□□□□ -0.02
CAPN1-223ENST00000533079 RHPN1Q8TCX5 695 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 KIF1BPQ96EK5 621 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 PAG1Q9NWQ8 432 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 NYAP2Q9P242 653 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 RIPK3Q9Y572 518 aa14.91□□□□□ -0.02
CAPN1-223ENST00000533079 MYH7P12883 1935 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 CTAGE5O15320 804 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 PRKAB2O43741 272 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 FDX1P10109 184 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 POU3F3P20264 500 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-223ENST00000533079 FGD4Q96M96 766 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 SLC38A10Q9HBR0 1119 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 IL1RAPL2Q9NP60 686 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 SLC4A7Q9Y6M7 1214 aa14.9□□□□□ -0.02
CAPN1-223ENST00000533079 CYP2D7A0A087X1C5 515 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 F5H6K3 240 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 ZEB2O60315 1214 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
CAPN1-223ENST00000533079 KLRC3Q07444 240 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 ITGA7Q13683 1181 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 UBE3CQ15386 1083 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 OTOP2Q7RTS6 562 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 TLK2Q86UE8 772 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 CCDC144CPQ8IYA2 1237 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
CAPN1-223ENST00000533079 COG5Q9UP83 839 aa14.89□□□□□ -0.03
CAPN1-223ENST00000533079 GTPBP6O43824 516 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-223ENST00000533079 NDUFB10O96000 172 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 IRX5P78411 483 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-223ENST00000533079 TNFAIP2Q03169 654 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 ZSCAN25Q6NSZ9 544 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 CXCL17Q6UXB2 119 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 NUP88Q99567 741 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-223ENST00000533079 NOC4LQ9BVI4 516 aaKnown RBP14.88□□□□□ -0.03
CAPN1-223ENST00000533079 FEM1BQ9UK73 627 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 SLC4A4Q9Y6R1 1079 aa14.88□□□□□ -0.03
CAPN1-223ENST00000533079 ASB14A6NK59 587 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
CAPN1-223ENST00000533079 FSCN1Q16658 493 aaKnown RBP14.87□□□□□ -0.03
CAPN1-223ENST00000533079 SBK1Q52WX2 424 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 RPAP2Q8IXW5 612 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-223ENST00000533079 MICALL1Q8N3F8 863 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 KIFC2Q96AC6 838 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 WNT8AQ9H1J5 351 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 ACAD9Q9H845 621 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
CAPN1-223ENST00000533079 GNEQ9Y223 722 aaKnown RBP14.87□□□□□ -0.03
CAPN1-223ENST00000533079 Q9Y3F1 56 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 UMODL1Q5DID0 1318 aa14.87□□□□□ -0.03
CAPN1-223ENST00000533079 SMIM22K7EJ46 135 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 B4GALT4O60513 344 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 ATP5JP18859 108 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 RASA1P20936 1047 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 KCNQ1P51787 676 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 BEX3Q00994 111 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 TFF2Q03403 129 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 SKIV2LQ15477 1246 aaKnown RBP14.86□□□□□ -0.03
CAPN1-223ENST00000533079 TMEM67Q5HYA8 995 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 FAM133AQ8N9E0 248 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 NECAB3Q96P71 396 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-223ENST00000533079 HAUS7Q99871 368 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 AP5M1Q9H0R1 490 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 ASTN1O14525 1302 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 MYH4Q9Y623 1939 aa14.86□□□□□ -0.03
CAPN1-223ENST00000533079 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-223ENST00000533079 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 RLBP1P12271 317 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 RABGGTBP53611 331 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 CCL23P55773 120 aa14.85□□□□□ -0.03
CAPN1-223ENST00000533079 TKFCQ3LXA3 575 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms