RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
VPS26B-203ENST00000525918 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
VPS26B-203ENST00000525918 ELP1O95163 1332 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 PRDM1O75626 825 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 TIMP1P01033 207 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
VPS26B-203ENST00000525918 CST5P28325 142 aaPredicted RBP12.73□□□□□ -0.37
VPS26B-203ENST00000525918 PDE4BQ07343 736 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
VPS26B-203ENST00000525918 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
VPS26B-203ENST00000525918 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.72□□□□□ -0.37
VPS26B-203ENST00000525918 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.72□□□□□ -0.37
VPS26B-203ENST00000525918 M0R2C6 588 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 ASGR1P07306 291 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
VPS26B-203ENST00000525918 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 BMP3P12645 472 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 CDK7P50613 346 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 GJA9P57773 515 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 TSHZ3Q63HK5 1081 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 SLFN13Q68D06 897 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
VPS26B-203ENST00000525918 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
VPS26B-203ENST00000525918 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 TTC41PQ6P2S7 1318 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 MYADML2A6NDP7 307 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 FOSL2P15408 326 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 STAT2P52630 851 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 ARMCX2Q7L311 632 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 CCDC144CPQ8IYA2 1237 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
VPS26B-203ENST00000525918 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 FGD4Q96M96 766 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
VPS26B-203ENST00000525918 VCANP13611 3396 aa12.71□□□□□ -0.38
VPS26B-203ENST00000525918 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 A0A0U1RQG5 324 aaPredicted RBP12.7□□□□□ -0.38
VPS26B-203ENST00000525918 ARVCFO00192 962 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 ERC2O15083 957 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 ADCY6O43306 1168 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
VPS26B-203ENST00000525918 TFAP4Q01664 338 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 SEC62Q99442 399 aaKnown RBP12.7□□□□□ -0.38
VPS26B-203ENST00000525918 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS26B-203ENST00000525918 NAPBQ9H115 298 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
VPS26B-203ENST00000525918 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
VPS26B-203ENST00000525918 PLA2G6O60733 806 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 DNAJB2P25686 324 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 SLC1A4P43007 532 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 NKX3-2P78367 333 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 PPARAQ07869 468 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 IKQ13123 557 aaPredicted RBP12.69□□□□□ -0.38
VPS26B-203ENST00000525918 PPIGQ13427 754 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS26B-203ENST00000525918 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 GMCL1Q96IK5 515 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
VPS26B-203ENST00000525918 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
VPS26B-203ENST00000525918 ZNF536O15090 1300 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 ASB14A6NK59 587 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 CTAGE5O15320 804 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 TNFAIP2Q03169 654 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 GRIN2CQ14957 1233 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 FAM126BQ8IXS8 530 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 ZNF576Q9H609 170 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
VPS26B-203ENST00000525918 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
VPS26B-203ENST00000525918 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-203ENST00000525918 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 CABYRO75952 493 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 CD4P01730 458 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 CSF2RAP15509 400 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 MCCP23508 829 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
VPS26B-203ENST00000525918 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms