RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 RNF20Q5VTR2 975 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 C1orf53Q5VUE5 145 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 SNRNP48Q6IEG0 339 aaKnown RBP14.36□□□□□ -0.11
CHKA-203ENST00000525155 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
CHKA-203ENST00000525155 MAMDC4Q6UXC1 1216 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 MFSD6Q6ZSS7 791 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHKA-203ENST00000525155 RASGRP2Q7LDG7 609 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 KIFC2Q96AC6 838 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 IL25Q9H293 177 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 CNNM2Q9H8M5 875 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 PDLIM7Q9NR12 457 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 GREB1LQ9C091 1923 aaPredicted RBP14.36□□□□□ -0.11
CHKA-203ENST00000525155 ZNF536O15090 1300 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 SMCHD1A6NHR9 2005 aa14.36□□□□□ -0.11
CHKA-203ENST00000525155 MYADML2A6NDP7 307 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 ORC4O43929 436 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 TTLL1O95922 423 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 FGRP09769 529 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 NOVP48745 357 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 EPHB4P54760 987 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 AKNAD1Q5T1N1 836 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 GMCL1P1Q8NEA9 526 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 BADQ92934 168 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 KATNBL1Q9H079 304 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
CHKA-203ENST00000525155 XPNPEP3Q9NQH7 507 aa14.35□□□□□ -0.11
CHKA-203ENST00000525155 DDX49Q9Y6V7 483 aaKnown RBP14.35□□□□□ -0.11
CHKA-203ENST00000525155 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 PTGS1P23219 599 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 SNAP25P60880 206 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 PTH1RQ03431 593 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 TRDNQ13061 729 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 ESR2Q92731 530 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 KRT23Q9C075 422 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 RBM8AQ9Y5S9 174 aaKnown RBP14.34□□□□□ -0.11
CHKA-203ENST00000525155 PARP14Q460N5 1801 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
CHKA-203ENST00000525155 CTAGE5O15320 804 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 ZBED4O75132 1171 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 RARBP10826 455 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 BMP3P12645 472 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 MCCP23508 829 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 HAND2P61296 217 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 AGBL1Q96MI9 1066 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 GUCD1Q96NT3 240 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 SYNPO2Q9UMS6 1093 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 ASTN1O14525 1302 aa14.33□□□□□ -0.12
CHKA-203ENST00000525155 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 RANBP6O60518 1105 aaKnown RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 COPB2P35606 906 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 MSL3Q8N5Y2 521 aaKnown RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 LBHD1Q9BQE6 289 aaPredicted RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.32□□□□□ -0.12
CHKA-203ENST00000525155 SYNGAP1Q96PV0 1343 aa14.32□□□□□ -0.12
CHKA-203ENST00000525155 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 AKR1A1P14550 325 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 KRT32Q14532 448 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 KCNA10Q16322 511 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 KCTD1Q719H9 257 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
CHKA-203ENST00000525155 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
CHKA-203ENST00000525155 STXBP5LQ9Y2K9 1186 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
CHKA-203ENST00000525155 COL11A1P12107 1806 aaPredicted RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 KIAA0355O15063 1070 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 PLA2G6O60733 806 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CYP21A2P08686 494 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CDK7P50613 346 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 ACLYP53396 1101 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 OAZ1P54368 228 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms