RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RNF146Q9NTX7 359 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 NAP1L2Q9ULW6 460 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 TAF6LQ9Y6J9 622 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 PFASO15067 1338 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 SH2B2O14492 632 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 MYCP01106 439 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 HOXC6P09630 235 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 CAPN2P17655 700 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 CASTP20810 708 aaKnown RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 LIFRP42702 1097 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 ANTXR2P58335 489 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 CAP1Q01518 475 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 GRM4Q14833 912 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 CDC37Q16543 378 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 TTBK2Q6IQ55 1244 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 RASGRP2Q7LDG7 609 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 REPS2Q8NFH8 660 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZNF333Q96JL9 665 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 MAP3K14Q99558 947 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 HMX1Q9NP08 348 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 RBM28Q9NW13 759 aaKnown RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 SEC63Q9UGP8 760 aaKnown RBP6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 GJD2Q9UKL4 321 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 SNX14Q9Y5W7 946 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 CYP46A1Q9Y6A2 500 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 MYH4Q9Y623 1939 aa6.28□□□□□ -1.4
HMGB1P40-201ENST00000525121 ABCB11O95342 1321 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 KLF18A0A0U1RQI7 1052 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCDC196A0A1B0GTZ2 297 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 GOLGA8BA8MQT2 603 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 B4DLN1 442 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 POTEB2H3BUK9 544 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZBTB43O43298 467 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCL5P13501 91 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 PRKAR2AP13861 404 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 RPS6KB1P23443 525 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 CNGA1P29973 690 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 MRPL12P52815 198 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 RCAN1P53805 252 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 SOX10P56693 466 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 ANAPC15P60006 121 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 SNAP25P60880 206 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 TROAPQ12815 778 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 USH1GQ495M9 461 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 IFFO2Q5TF58 517 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 OLFML2BQ68BL8 750 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 POTEEQ6S8J3 1075 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 NSMFQ6X4W1 530 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 SGMS1Q86VZ5 419 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 FBXO11Q86XK2 927 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 HOMER1Q86YM7 354 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 MCF2L2Q86YR7 1114 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 RASEFQ8IZ41 740 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 ADGRF4Q8IZF3 695 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 TRIB2Q92519 343 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 USP6NLQ92738 828 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 KCNB2Q92953 911 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 RRP36Q96EU6 259 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 AMNQ9BXJ7 453 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 USP26Q9BXU7 913 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 LRRC2Q9BYS8 371 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 UBA5Q9GZZ9 404 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 RNF208Q9H0X6 261 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 VAT1LQ9HCJ6 419 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 ADD3Q9UEY8 706 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 CNPY2Q9Y2B0 182 aa6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 DIS3Q9Y2L1 958 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 MRPL11Q9Y3B7 192 aaKnown RBP6.27□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF536O15090 1300 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 RPTORQ8N122 1335 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 PTPDC1A2A3K4 754 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ASB14A6NK59 587 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 GOLGA8AA7E2F4 631 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZBTB5O15062 677 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 MSCO60682 206 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 PGK2P07205 417 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 GJB1P08034 283 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 METAP2P50579 478 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 PPP2R5BQ15173 497 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ANKRD1Q15327 319 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCL14Q16627 93 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 RTN1Q16799 776 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 QRICH1Q2TAL8 776 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ADCK5Q3MIX3 580 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 CPLX2Q6PUV4 134 aaKnown RBP6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 APOA5Q6Q788 366 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 RNF207Q6ZRF8 634 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 ZNF467Q7Z7K2 595 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 STAG2Q8N3U4 1231 aa6.26□□□□□ -1.41
HMGB1P40-201ENST00000525121 FANCBQ8NB91 859 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms