RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 SPATC1LQ9H0A9 340 aa18.17■□□□□ 0.5
RB1-205ENST00000525036 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
RB1-205ENST00000525036 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
RB1-205ENST00000525036 KIF5BP33176 963 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 SP3Q02447 781 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 SCRN1Q12765 414 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 CDC37Q16543 378 aaPredicted RBP18.16■□□□□ 0.5
RB1-205ENST00000525036 FAM110CQ1W6H9 321 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 MTMR8Q96EF0 704 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
RB1-205ENST00000525036 NID2Q14112 1375 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 ZSWIM8A7E2V4 1837 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 COL11A1P12107 1806 aaPredicted RBP18.15■□□□□ 0.5
RB1-205ENST00000525036 PFKFB2O60825 505 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 STAT3P40763 770 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 ANKRD1Q15327 319 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 NTRK3Q16288 839 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 QRICH1Q2TAL8 776 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 HOMER1Q86YM7 354 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 CD99L2Q8TCZ2 262 aa18.15■□□□□ 0.5
RB1-205ENST00000525036 FKTNO75072 461 aa18.14■□□□□ 0.5
RB1-205ENST00000525036 RCAN1P53805 252 aa18.14■□□□□ 0.5
RB1-205ENST00000525036 LACTBP83111 547 aaPredicted RBP18.14■□□□□ 0.5
RB1-205ENST00000525036 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.5
RB1-205ENST00000525036 GTF3C2Q8WUA4 911 aaPredicted RBP18.14■□□□□ 0.5
RB1-205ENST00000525036 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.5
RB1-205ENST00000525036 CNTNAP5Q8WYK1 1306 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 ATP2A1O14983 1001 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 ERCC3P19447 782 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 CTCFP49711 727 aaPredicted RBP18.14■□□□□ 0.49
RB1-205ENST00000525036 PHKBQ93100 1093 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 TRIM47Q96LD4 638 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 SPZ1Q9BXG8 430 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 SLKQ9H2G2 1235 aaPredicted RBP18.14■□□□□ 0.49
RB1-205ENST00000525036 HOMER2Q9NSB8 354 aa18.14■□□□□ 0.49
RB1-205ENST00000525036 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.49
RB1-205ENST00000525036 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
RB1-205ENST00000525036 V9GY48 417 aaPredicted RBP18.14■□□□□ 0.49
RB1-205ENST00000525036 CTDNEP1O95476 244 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 ICAM1P05362 532 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 PSMC4P43686 418 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 GNAQP50148 359 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 USH1GQ495M9 461 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 NOM1Q5C9Z4 860 aaKnown RBP18.13■□□□□ 0.49
RB1-205ENST00000525036 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 NCAPG2Q86XI2 1143 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 RIOX2Q8IUF8 465 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
RB1-205ENST00000525036 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
RB1-205ENST00000525036 ZBTB5O15062 677 aa18.12■□□□□ 0.49
RB1-205ENST00000525036 ALAS1P13196 640 aa18.12■□□□□ 0.49
RB1-205ENST00000525036 SMARCA1P28370 1054 aa18.12■□□□□ 0.49
RB1-205ENST00000525036 CCPG1Q9ULG6 757 aa18.12■□□□□ 0.49
RB1-205ENST00000525036 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 ST18O60284 1047 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 FDX1P10109 184 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 OAZ1P54368 228 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 WDR78Q5VTH9 848 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 GTF3C6Q969F1 213 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 COA7Q96BR5 231 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 SMCHD1A6NHR9 2005 aa18.11■□□□□ 0.49
RB1-205ENST00000525036 PKN1Q16512 942 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 GPR142Q7Z601 462 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 FBXO11Q86XK2 927 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 TBC1D5Q92609 795 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
RB1-205ENST00000525036 TRERF1Q96PN7 1200 aa18.1■□□□□ 0.49
RB1-205ENST00000525036 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 NFIBO00712 420 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 FMNL1O95466 1100 aaPredicted RBP18.09■□□□□ 0.49
RB1-205ENST00000525036 IFNAR1P17181 557 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 CCNA1P78396 465 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 PPP2R5BQ15173 497 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
RB1-205ENST00000525036 TMX3Q96JJ7 454 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 SLC26A6Q9BXS9 759 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 RNF146Q9NTX7 359 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 GABRQQ9UN88 632 aa18.09■□□□□ 0.49
RB1-205ENST00000525036 TNPO2O14787 897 aaKnown RBP18.08■□□□□ 0.49
RB1-205ENST00000525036 OPLAHO14841 1288 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 JAK2O60674 1132 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 SLC25A27O95847 323 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 MAPK4P31152 587 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 PLEKHH3Q7Z736 793 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 SHISA4Q96DD7 197 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 GJD2Q9UKL4 321 aa18.08■□□□□ 0.49
RB1-205ENST00000525036 CASP8AP2Q9UKL3 1982 aa18.08■□□□□ 0.48
RB1-205ENST00000525036 CPLX1O14810 134 aa18.07■□□□□ 0.48
RB1-205ENST00000525036 PRPF3O43395 683 aaKnown RBP18.07■□□□□ 0.48
RB1-205ENST00000525036 FCGRTP55899 365 aa18.07■□□□□ 0.48
RB1-205ENST00000525036 WWC2Q6AWC2 1192 aa18.07■□□□□ 0.48
RB1-205ENST00000525036 TYW1BQ6NUM6 668 aa18.07■□□□□ 0.48
RB1-205ENST00000525036 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
RB1-205ENST00000525036 ERO1AQ96HE7 468 aa18.07■□□□□ 0.48
RB1-205ENST00000525036 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms