RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 PPP1R12CQ9BZL4 782 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
CSTF3-206ENST00000524827 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 ACRP10323 421 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 GIMAP6Q6P9H5 292 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 PSRC1Q6PGN9 363 aaPredicted RBP16.54■□□□□ 0.24
CSTF3-206ENST00000524827 ZNF365Q70YC5 407 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 GAS2L1Q99501 681 aaPredicted RBP16.54■□□□□ 0.24
CSTF3-206ENST00000524827 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 FBXO40Q9UH90 709 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 MUC3AQ02505 3323 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 CHD9Q3L8U1 2897 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 NCOR1O75376 2440 aa16.54■□□□□ 0.24
CSTF3-206ENST00000524827 TNFRSF10AO00220 468 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 CTAGE5O15320 804 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 TLR3O15455 904 aaKnown RBP16.53■□□□□ 0.24
CSTF3-206ENST00000524827 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 PRDM12Q9H4Q4 367 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
CSTF3-206ENST00000524827 FEM1BQ9UK73 627 aa16.53■□□□□ 0.24
CSTF3-206ENST00000524827 SMARCA5O60264 1052 aaPredicted RBP16.52■□□□□ 0.24
CSTF3-206ENST00000524827 PRDM1O75626 825 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 CYP2C18P33260 490 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 OAZ1P54368 228 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 NKX3-2P78367 333 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 AKNAD1Q5T1N1 836 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
CSTF3-206ENST00000524827 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 HOMER2Q9NSB8 354 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
CSTF3-206ENST00000524827 ASTN1O14525 1302 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 CD4P01730 458 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 BEX3Q00994 111 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 APPBP2Q92624 585 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 MKL1Q969V6 931 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 IL23AQ9NPF7 189 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 SYNPO2Q9UMS6 1093 aa16.51■□□□□ 0.23
CSTF3-206ENST00000524827 LRRC37A2A6NM11 1700 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-206ENST00000524827 GPAA1O43292 621 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 TTLL1O95922 423 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 TDO2P48775 406 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 ADGRE1Q14246 886 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 RAB30Q15771 203 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-206ENST00000524827 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 ATXN2LQ8WWM7 1075 aaKnown RBP16.5■□□□□ 0.23
CSTF3-206ENST00000524827 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 ECHDC1Q9NTX5 307 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
CSTF3-206ENST00000524827 THEGQ9P2T0 379 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 MSRAQ9UJ68 235 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 PLIN4Q96Q06 1357 aa16.5■□□□□ 0.23
CSTF3-206ENST00000524827 UMODL1Q5DID0 1318 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 BMP3P12645 472 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
CSTF3-206ENST00000524827 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 GBF1Q92538 1859 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
CSTF3-206ENST00000524827 NKX2-4Q9H2Z4 354 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 HIPK3Q9H422 1215 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
CSTF3-206ENST00000524827 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
CSTF3-206ENST00000524827 RNF146Q9NTX7 359 aa16.49■□□□□ 0.23
CSTF3-206ENST00000524827 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
CSTF3-206ENST00000524827 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 M0R2C6 588 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
CSTF3-206ENST00000524827 FDX1P10109 184 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 GNAT2P19087 354 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 COL9A1P20849 921 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 STAT2P52630 851 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 TLK2Q86UE8 772 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 ASB2Q96Q27 587 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
CSTF3-206ENST00000524827 YBX2Q9Y2T7 364 aaKnown RBP16.48■□□□□ 0.23
CSTF3-206ENST00000524827 CHD7Q9P2D1 2997 aa16.48■□□□□ 0.23
CSTF3-206ENST00000524827 ZNF536O15090 1300 aa16.47■□□□□ 0.23
CSTF3-206ENST00000524827 GRIN2DO15399 1336 aa16.47■□□□□ 0.23
CSTF3-206ENST00000524827 BDP1A6H8Y1 2624 aa16.47■□□□□ 0.23
CSTF3-206ENST00000524827 ASB14A6NK59 587 aa16.47■□□□□ 0.23
CSTF3-206ENST00000524827 CABYRO75952 493 aa16.47■□□□□ 0.23
CSTF3-206ENST00000524827 FGBP02675 491 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms