RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 GPR55Q9Y2T6 319 aaPredicted RBP7.08□□□□□ -1.28
NPM1-212ENST00000524204 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 ARL4AP40617 200 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 LIG3P49916 1009 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 PCBP3P57721 371 aaKnown RBP7.07□□□□□ -1.28
NPM1-212ENST00000524204 CYP4F8P98187 520 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 TMEM62Q0P6H9 643 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 LAPTM5Q13571 262 aa7.07□□□□□ -1.28
NPM1-212ENST00000524204 CCDC85BQ15834 202 aaPredicted RBP7.07□□□□□ -1.28
NPM1-212ENST00000524204 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
NPM1-212ENST00000524204 RECKO95980 971 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 SYPP08247 313 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 ATF2P15336 505 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 MAPK1P28482 360 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 FOXO4P98177 505 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 SAPCD2Q86UD0 394 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 LNPKQ9C0E8 428 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 TNFRSF10DQ9UBN6 386 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 SPG7Q9UQ90 795 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 HCFC2Q9Y5Z7 792 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 TAF6LQ9Y6J9 622 aa7.06□□□□□ -1.28
NPM1-212ENST00000524204 ARID4BQ4LE39 1312 aaPredicted RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 WTIPA6NIX2 430 aaPredicted RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 PFKLP17858 780 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 ACVRL1P37023 503 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 HTRA3P83110 453 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 SNW1Q13573 536 aaKnown RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 CRB2Q5IJ48 1285 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 ALG1LQ6GMV1 187 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 FBXO33Q7Z6M2 555 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 SLCO6A1Q86UG4 719 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 ZNF655Q8N720 491 aaPredicted RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 CCDC74BQ96LY2 380 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 HIRIP3Q9BW71 556 aaPredicted RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 ASCC2Q9H1I8 757 aaPredicted RBP7.05□□□□□ -1.28
NPM1-212ENST00000524204 SLITRK6Q9H5Y7 841 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 ACSL6Q9UKU0 697 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 MINPP1Q9UNW1 487 aa7.05□□□□□ -1.28
NPM1-212ENST00000524204 SH3D21A4FU49 640 aa7.04□□□□□ -1.28
NPM1-212ENST00000524204 DNAJA2O60884 412 aa7.04□□□□□ -1.28
NPM1-212ENST00000524204 TACR2P21452 398 aa7.04□□□□□ -1.28
NPM1-212ENST00000524204 FMR1Q06787 632 aaKnown RBP eCLIP7.04□□□□□ -1.28
NPM1-212ENST00000524204 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
NPM1-212ENST00000524204 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
NPM1-212ENST00000524204 KIF2CQ99661 725 aa7.04□□□□□ -1.28
NPM1-212ENST00000524204 GDF5P43026 501 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 MAPKAPK2P49137 400 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 EAPPQ56P03 285 aaPredicted RBP7.03□□□□□ -1.28
NPM1-212ENST00000524204 ZC3H14Q6PJT7 736 aaKnown RBP7.03□□□□□ -1.28
NPM1-212ENST00000524204 DPH6Q7L8W6 267 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 SPRED1Q7Z699 444 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 LOXL4Q96JB6 756 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 ASB16Q96NS5 453 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 PMF1-BGLAPU3KQ54 211 aa7.03□□□□□ -1.28
NPM1-212ENST00000524204 SCAMP3O14828 347 aaKnown RBP7.02□□□□□ -1.29
NPM1-212ENST00000524204 NOP9Q86U38 636 aaKnown RBP7.02□□□□□ -1.29
NPM1-212ENST00000524204 ERVK13-1Q9NX77 482 aa7.02□□□□□ -1.29
NPM1-212ENST00000524204 KLHL3Q9UH77 587 aa7.02□□□□□ -1.29
NPM1-212ENST00000524204 ITGAEP38570 1179 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
NPM1-212ENST00000524204 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 SAMD11Q96NU1 681 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 REV1Q9UBZ9 1251 aa7.01□□□□□ -1.29
NPM1-212ENST00000524204 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
NPM1-212ENST00000524204 CYR61O00622 381 aa7□□□□□ -1.29
NPM1-212ENST00000524204 CARFQ8N187 725 aa7□□□□□ -1.29
NPM1-212ENST00000524204 TMEM52Q8NDY8 209 aa7□□□□□ -1.29
NPM1-212ENST00000524204 BACH2Q9BYV9 841 aa7□□□□□ -1.29
NPM1-212ENST00000524204 PRAMEF1O95521 474 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 MVKQ03426 396 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 TARBP2Q15633 366 aaKnown RBP6.99□□□□□ -1.29
NPM1-212ENST00000524204 NBPF9Q3BBW0 867 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 CRIP3Q6Q6R5 217 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 BNC2Q6ZN30 1099 aaPredicted RBP6.99□□□□□ -1.29
NPM1-212ENST00000524204 PHACTR4Q8IZ21 702 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 TTC9BQ8N6N2 239 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 SH3RF3Q8TEJ3 882 aaPredicted RBP6.99□□□□□ -1.29
NPM1-212ENST00000524204 JMJD8Q96S16 334 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 PRR36Q9H6K5 1346 aa6.99□□□□□ -1.29
NPM1-212ENST00000524204 A0A1W2PQ45 241 aaPredicted RBP6.98□□□□□ -1.29
NPM1-212ENST00000524204 A0A1W2PQY0 241 aa6.98□□□□□ -1.29
NPM1-212ENST00000524204 MC3RP41968 323 aa6.98□□□□□ -1.29
NPM1-212ENST00000524204 NR1I3Q14994 352 aa6.98□□□□□ -1.29
NPM1-212ENST00000524204 FAM221AA4D161 298 aa6.97□□□□□ -1.29
NPM1-212ENST00000524204 UBOX5O94941 541 aa6.97□□□□□ -1.29
NPM1-212ENST00000524204 GBP1P32455 592 aa6.97□□□□□ -1.29
NPM1-212ENST00000524204 GJA9P57773 515 aa6.97□□□□□ -1.29
NPM1-212ENST00000524204 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
NPM1-212ENST00000524204 TBC1D10BQ4KMP7 808 aaPredicted RBP6.97□□□□□ -1.29
NPM1-212ENST00000524204 NOL8Q76FK4 1167 aaKnown RBP6.97□□□□□ -1.29
NPM1-212ENST00000524204 SSBP3Q9BWW4 388 aaPredicted RBP6.97□□□□□ -1.29
NPM1-212ENST00000524204 POLR3KQ9Y2Y1 108 aaPredicted RBP6.97□□□□□ -1.29
NPM1-212ENST00000524204 ATP2B1P20020 1258 aa6.96□□□□□ -1.3
NPM1-212ENST00000524204 TGM1P22735 817 aa6.96□□□□□ -1.3
NPM1-212ENST00000524204 CDSNQ15517 529 aa6.96□□□□□ -1.3
NPM1-212ENST00000524204 NBPF12Q5TAG4 269 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms