RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TRPV6Q9H1D0 765 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 MCM9Q9NXL9 1143 aa21.19■□□□□ 0.98
PVT1-220ENST00000524165 LPXNO60711 386 aa21.18■□□□□ 0.98
PVT1-220ENST00000524165 EVX2Q03828 476 aa21.18■□□□□ 0.98
PVT1-220ENST00000524165 GRIN2DO15399 1336 aa21.18■□□□□ 0.98
PVT1-220ENST00000524165 ACTN1P12814 892 aa21.17■□□□□ 0.98
PVT1-220ENST00000524165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.17■□□□□ 0.98
PVT1-220ENST00000524165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.16■□□□□ 0.98
PVT1-220ENST00000524165 PNMA6EA0A0J9YXQ4 647 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 KIF28PB7ZC32 967 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 ARHGEF15O94989 841 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 LEXMQ3ZCV2 418 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 SNRNP48Q6IEG0 339 aaKnown RBP21.16■□□□□ 0.98
PVT1-220ENST00000524165 ARMCX2Q7L311 632 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 CRNKL1Q9BZJ0 848 aaKnown RBP21.16■□□□□ 0.98
PVT1-220ENST00000524165 KATNBL1Q9H079 304 aa21.16■□□□□ 0.98
PVT1-220ENST00000524165 UBE2ZQ9H832 354 aaPredicted RBP21.16■□□□□ 0.98
PVT1-220ENST00000524165 ASTN1O14525 1302 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 AKR1B1P15121 316 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 SSTR3P32745 418 aaPredicted RBP21.15■□□□□ 0.98
PVT1-220ENST00000524165 CCDC17Q96LX7 622 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 FGD4Q96M96 766 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 GOPCQ9HD26 462 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 RIPK3Q9Y572 518 aa21.15■□□□□ 0.98
PVT1-220ENST00000524165 MAGEB6P1A0A0J9YX57 407 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 ATP2A1O14983 1001 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 ZEB2O60315 1214 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 TNFAIP2Q03169 654 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 HERC6Q8IVU3 1022 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 GNEQ9Y223 722 aaKnown RBP21.14■□□□□ 0.97
PVT1-220ENST00000524165 CACNA1AO00555 2505 aa21.14■□□□□ 0.97
PVT1-220ENST00000524165 DCXO43602 365 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 GNAI2P04899 355 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 SUPT20HL2P0C7V6 817 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
PVT1-220ENST00000524165 RFC2P35250 354 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 FSCN1Q16658 493 aaKnown RBP21.13■□□□□ 0.97
PVT1-220ENST00000524165 FAM83BQ5T0W9 1011 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 DEFB128Q7Z7B8 93 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 TLK2Q86UE8 772 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 CCDC144CPQ8IYA2 1237 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.13■□□□□ 0.97
PVT1-220ENST00000524165 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
PVT1-220ENST00000524165 PTPRSQ13332 1948 aa21.13■□□□□ 0.97
PVT1-220ENST00000524165 USP34Q70CQ2 3546 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 TANC1Q9C0D5 1861 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.12■□□□□ 0.97
PVT1-220ENST00000524165 POTEB3A0JP26 581 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 POTEBQ6S5H4 581 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 SLF1Q9BQI6 1058 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 ALDH8A1Q9H2A2 487 aaPredicted RBP21.12■□□□□ 0.97
PVT1-220ENST00000524165 KANSL2Q9H9L4 492 aa21.12■□□□□ 0.97
PVT1-220ENST00000524165 DCP1AQ9NPI6 582 aaPredicted RBP21.12■□□□□ 0.97
PVT1-220ENST00000524165 CYP2D6P10635 497 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 SLFN5Q08AF3 891 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
PVT1-220ENST00000524165 ANKRD35Q8N283 1001 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 DYNLL2Q96FJ2 89 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 AP5M1Q9H0R1 490 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 FBXO40Q9UH90 709 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 BAZ2AQ9UIF9 1905 aaKnown RBP21.11■□□□□ 0.97
PVT1-220ENST00000524165 TET1Q8NFU7 2136 aa21.11■□□□□ 0.97
PVT1-220ENST00000524165 ZNF536O15090 1300 aa21.1■□□□□ 0.97
PVT1-220ENST00000524165 ST18O60284 1047 aa21.1■□□□□ 0.97
PVT1-220ENST00000524165 IL9P15248 144 aa21.1■□□□□ 0.97
PVT1-220ENST00000524165 PSMC6P62333 389 aa21.1■□□□□ 0.97
PVT1-220ENST00000524165 ZDBF2Q9HCK1 2354 aa21.1■□□□□ 0.97
PVT1-220ENST00000524165 CT47B1P0C2W7 299 aaPredicted RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 KCNA5P22460 613 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 OS9Q13438 667 aaPredicted RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 PUS10Q3MIT2 529 aaKnown RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 PTCRAQ6ISU1 281 aaPredicted RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 PRPF38AQ8NAV1 312 aaKnown RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 GDPD5Q8WTR4 605 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 SDR42E1Q8WUS8 393 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 ARHGAP45Q92619 1136 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 TLR7Q9NYK1 1049 aaKnown RBP21.09■□□□□ 0.97
PVT1-220ENST00000524165 Q9Y3F1 56 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 CFAP54Q96N23 3096 aa21.09■□□□□ 0.97
PVT1-220ENST00000524165 SIP14410 1827 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 GRXCR2A6NFK2 248 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 TRIOO75962 3097 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 BAIAP3O94812 1187 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 CYP2C9P11712 490 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 FOXK2Q01167 660 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 POLA2Q14181 598 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 CHST13Q8NET6 341 aa21.08■□□□□ 0.97
PVT1-220ENST00000524165 TNKSO95271 1327 aa21.07■□□□□ 0.96
PVT1-220ENST00000524165 DYNC1LI2O43237 492 aaPredicted RBP21.07■□□□□ 0.96
PVT1-220ENST00000524165 RAD21O60216 631 aa21.07■□□□□ 0.96
PVT1-220ENST00000524165 CDK8P49336 464 aa21.07■□□□□ 0.96
PVT1-220ENST00000524165 CPXCR1Q8N123 301 aa21.07■□□□□ 0.96
PVT1-220ENST00000524165 MFSD14AQ96MC6 490 aa21.07■□□□□ 0.96
PVT1-220ENST00000524165 TRMT13Q9NUP7 481 aaKnown RBP21.07■□□□□ 0.96
PVT1-220ENST00000524165 GREB1LQ9C091 1923 aaPredicted RBP21.06■□□□□ 0.96
PVT1-220ENST00000524165 PITPNM1O00562 1244 aa21.06■□□□□ 0.96
PVT1-220ENST00000524165 ZBED4O75132 1171 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms