RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 SMCHD1A6NHR9 2005 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 CCND3P30281 292 aaPredicted RBP19.21■□□□□ 0.67
PABPC1-221ENST00000522720 CYP2C19P33261 490 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 SNAP25P60880 206 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 SEC23AQ15436 765 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 ZNF792Q3KQV3 632 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 TKFCQ3LXA3 575 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 GPATCH4Q5T3I0 446 aaKnown RBP19.21■□□□□ 0.67
PABPC1-221ENST00000522720 UBE2Q1Q7Z7E8 422 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 DDX11Q96FC9 970 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 MAML3Q96JK9 1138 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 AGBL1Q96MI9 1066 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
PABPC1-221ENST00000522720 ANO2Q9NQ90 1003 aa19.21■□□□□ 0.67
PABPC1-221ENST00000522720 DNAJC25-GNG10A0A024R161 153 aa19.2■□□□□ 0.66
PABPC1-221ENST00000522720 IFIT1BQ5T764 474 aaKnown RBP19.2■□□□□ 0.66
PABPC1-221ENST00000522720 CCDC174Q6PII3 467 aa19.2■□□□□ 0.66
PABPC1-221ENST00000522720 RALYLQ86SE5 291 aaKnown RBP19.2■□□□□ 0.66
PABPC1-221ENST00000522720 ICAM1P05362 532 aa19.19■□□□□ 0.66
PABPC1-221ENST00000522720 NECTIN1Q15223 517 aa19.19■□□□□ 0.66
PABPC1-221ENST00000522720 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
PABPC1-221ENST00000522720 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
PABPC1-221ENST00000522720 IFIT3O14879 490 aaKnown RBP19.18■□□□□ 0.66
PABPC1-221ENST00000522720 SLC27A2O14975 620 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 FARP2O94887 1054 aaPredicted RBP19.18■□□□□ 0.66
PABPC1-221ENST00000522720 GOLGA8HP0CJ92 632 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 ALAS1P13196 640 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 CREB3L3Q68CJ9 461 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 LHX8Q68G74 356 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 MB21D2Q8IYB1 491 aaPredicted RBP19.18■□□□□ 0.66
PABPC1-221ENST00000522720 ANKRD35Q8N283 1001 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 TRPV1Q8NER1 839 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 TRERF1Q96PN7 1200 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 RNF146Q9NTX7 359 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 OGDHLQ9ULD0 1010 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 CCPG1Q9ULG6 757 aa19.18■□□□□ 0.66
PABPC1-221ENST00000522720 CYBAP13498 195 aa19.17■□□□□ 0.66
PABPC1-221ENST00000522720 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
PABPC1-221ENST00000522720 ASPRV1Q53RT3 343 aa19.17■□□□□ 0.66
PABPC1-221ENST00000522720 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
PABPC1-221ENST00000522720 ANKLE1Q8NAG6 615 aa19.17■□□□□ 0.66
PABPC1-221ENST00000522720 TINF2Q9BSI4 451 aa19.17■□□□□ 0.66
PABPC1-221ENST00000522720 PNMA2Q9UL42 364 aa19.17■□□□□ 0.66
PABPC1-221ENST00000522720 ERICH2A1L162 156 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 PARP1P09874 1014 aaKnown RBP19.16■□□□□ 0.66
PABPC1-221ENST00000522720 CNGA1P29973 690 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 ANTXR2P58335 489 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 CHST3Q7LGC8 479 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 ZNF467Q7Z7K2 595 aaPredicted RBP19.16■□□□□ 0.66
PABPC1-221ENST00000522720 UBA5Q9GZZ9 404 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 DDX20Q9UHI6 824 aaKnown RBP19.16■□□□□ 0.66
PABPC1-221ENST00000522720 NRBP1Q9UHY1 535 aa19.16■□□□□ 0.66
PABPC1-221ENST00000522720 MSCO60682 206 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 WTAPQ15007 396 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 MUM1L1Q5H9M0 696 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 PRAMEF19Q5SWL8 479 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 MAMDC4Q6UXC1 1216 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 IGDCC4Q8TDY8 1250 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 MTA3Q9BTC8 594 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 CPVLQ9H3G5 476 aa19.15■□□□□ 0.66
PABPC1-221ENST00000522720 A1CFQ9NQ94 594 aaKnown RBP19.15■□□□□ 0.66
PABPC1-221ENST00000522720 POTEB2H3BUK9 544 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 MNX1P50219 401 aaPredicted RBP19.14■□□□□ 0.65
PABPC1-221ENST00000522720 TMEM67Q5HYA8 995 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 RNF20Q5VTR2 975 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 FAM133AQ8N9E0 248 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 PAWRQ96IZ0 340 aaKnown RBP19.14■□□□□ 0.65
PABPC1-221ENST00000522720 SENP2Q9HC62 589 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 PFASO15067 1338 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 WDR19Q8NEZ3 1342 aa19.14■□□□□ 0.65
PABPC1-221ENST00000522720 CEP290O15078 2479 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 SEPT4O43236 478 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
PABPC1-221ENST00000522720 MCM5P33992 734 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 NECAB2Q7Z6G3 386 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 ADGRF4Q8IZF3 695 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 STAG2Q8N3U4 1231 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 FGD4Q96M96 766 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 CYP39A1Q9NYL5 469 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 MCM3APO60318 1980 aa19.13■□□□□ 0.65
PABPC1-221ENST00000522720 FRMPD3Q5JV73 1810 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 PALM3A6NDB9 673 aaPredicted RBP19.12■□□□□ 0.65
PABPC1-221ENST00000522720 PRC1O43663 620 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 CNTN2Q02246 1040 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 TROAPQ12815 778 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 TSGA10IPQ3SY00 556 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 DIS3LQ8TF46 1054 aaKnown RBP19.12■□□□□ 0.65
PABPC1-221ENST00000522720 HTATIP2Q9BUP3 242 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 MAD2L2Q9UI95 211 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 CNPY2Q9Y2B0 182 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 MYH6P13533 1939 aa19.12■□□□□ 0.65
PABPC1-221ENST00000522720 KLRF2D3W0D1 207 aa19.11■□□□□ 0.65
PABPC1-221ENST00000522720 SNAI1O95863 264 aaPredicted RBP19.11■□□□□ 0.65
PABPC1-221ENST00000522720 ZNF865P0CJ78 1059 aaPredicted RBP19.11■□□□□ 0.65
PABPC1-221ENST00000522720 COL9A3Q14050 684 aaPredicted RBP19.11■□□□□ 0.65
PABPC1-221ENST00000522720 GRM4Q14833 912 aa19.11■□□□□ 0.65
PABPC1-221ENST00000522720 CDC37Q16543 378 aaPredicted RBP19.11■□□□□ 0.65
PABPC1-221ENST00000522720 NSMFQ6X4W1 530 aa19.11■□□□□ 0.65
PABPC1-221ENST00000522720 CATIPQ7Z7H3 387 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms