RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PDXDC2PQ6P474 469 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 TMEM179Q6ZVK1 233 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 KCTD1Q719H9 257 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 NEK8Q86SG6 692 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 IFNKQ9P0W0 207 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 BIN2Q9UBW5 565 aaPredicted RBP29.35■■■□□ 2.29
COL13A1-214ENST00000522165 SPDYE2BA6NHP3 402 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 SPDYE6P0CI01 402 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 ADCY7P51828 1080 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 MTMR8Q96EF0 704 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 XPO4Q9C0E2 1151 aaKnown RBP29.35■■■□□ 2.29
COL13A1-214ENST00000522165 VPS33BQ9H267 617 aa29.35■■■□□ 2.29
COL13A1-214ENST00000522165 SLC16A2P36021 539 aa29.34■■■□□ 2.29
COL13A1-214ENST00000522165 TXLNAP40222 546 aa29.34■■■□□ 2.29
COL13A1-214ENST00000522165 NOLC1Q14978 699 aaKnown RBP eCLIP29.34■■■□□ 2.29
COL13A1-214ENST00000522165 SEPT2Q15019 361 aa29.34■■■□□ 2.29
COL13A1-214ENST00000522165 JAKMIP3Q5VZ66 844 aa29.34■■■□□ 2.29
COL13A1-214ENST00000522165 SIAH1Q8IUQ4 282 aa29.34■■■□□ 2.29
COL13A1-214ENST00000522165 MYO1BO43795 1136 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 PPP1R11O60927 126 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-214ENST00000522165 FANCCQ00597 558 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 LETM2Q2VYF4 491 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 TBCKQ8TEA7 893 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 DCAF4Q8WV16 495 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 GSDMAQ96QA5 445 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 CCNT1O60563 726 aaKnown RBP29.33■■■□□ 2.29
COL13A1-214ENST00000522165 ATP1A3P13637 1013 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 LRMPQ12912 555 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 ABCB5Q2M3G0 1257 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 C17orf53Q8N3J3 647 aaPredicted RBP29.33■■■□□ 2.29
COL13A1-214ENST00000522165 SPTLC3Q9NUV7 552 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 TMEM260Q9NX78 707 aa29.33■■■□□ 2.29
COL13A1-214ENST00000522165 USP17L10C9JJH3 530 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 ZBTB5O15062 677 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 CASP1P29466 404 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 CDC25AP30304 524 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 ICA1Q05084 483 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 FBXO41Q8TF61 875 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 CACTINQ8WUQ7 758 aaKnown RBP29.32■■■□□ 2.28
COL13A1-214ENST00000522165 TMOD2Q9NZR1 351 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 HDAC9Q9UKV0 1011 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 GDF11O95390 407 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 ORC2Q13416 577 aaPredicted RBP29.32■■■□□ 2.28
COL13A1-214ENST00000522165 CSRNP1Q96S65 589 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 FANCLQ9NW38 375 aa29.32■■■□□ 2.28
COL13A1-214ENST00000522165 GOLGB1Q14789 3259 aaKnown RBP29.31■■■□□ 2.28
COL13A1-214ENST00000522165 OR52Z1P0C646 297 aa29.31■■■□□ 2.28
COL13A1-214ENST00000522165 FMR1Q06787 632 aaKnown RBP eCLIP29.31■■■□□ 2.28
COL13A1-214ENST00000522165 SLFN13Q68D06 897 aa29.31■■■□□ 2.28
COL13A1-214ENST00000522165 RIC8AQ9NPQ8 531 aa29.31■■■□□ 2.28
COL13A1-214ENST00000522165 NEMFO60524 1076 aa29.3■■■□□ 2.28
COL13A1-214ENST00000522165 SLC1A4P43007 532 aa29.3■■■□□ 2.28
COL13A1-214ENST00000522165 DLGAP5Q15398 846 aa29.3■■■□□ 2.28
COL13A1-214ENST00000522165 ENOX1Q8TC92 643 aaKnown RBP29.3■■■□□ 2.28
COL13A1-214ENST00000522165 MTRQ99707 1265 aa29.3■■■□□ 2.28
COL13A1-214ENST00000522165 KARSQ15046 597 aaKnown RBP29.3■■■□□ 2.28
COL13A1-214ENST00000522165 CT47A1Q5JQC4 288 aaPredicted RBP29.3■■■□□ 2.28
COL13A1-214ENST00000522165 DISC1Q9NRI5 854 aa29.3■■■□□ 2.28
COL13A1-214ENST00000522165 TCP10L2B9ZVM9 353 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 ERCC5P28715 1186 aaPredicted RBP29.29■■■□□ 2.28
COL13A1-214ENST00000522165 OGFOD1Q8N543 542 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 STAMQ92783 540 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 CCSER1Q9C0I3 900 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 ZNF70Q9UC06 446 aaPredicted RBP29.29■■■□□ 2.28
COL13A1-214ENST00000522165 ZNRF3Q9ULT6 936 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 ZBTB12Q9Y330 459 aaPredicted RBP29.29■■■□□ 2.28
COL13A1-214ENST00000522165 GTPBP6O43824 516 aaPredicted RBP29.29■■■□□ 2.28
COL13A1-214ENST00000522165 FILIP1Q7Z7B0 1213 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 LRRC8AQ8IWT6 810 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 IMPACTQ9P2X3 320 aa29.29■■■□□ 2.28
COL13A1-214ENST00000522165 CLRN2A0PK11 232 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 PP2D1A8MPX8 630 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 RAD21O60216 631 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 STAT6P42226 847 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 JAG1P78504 1218 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 RBM26Q5T8P6 1007 aaKnown RBP29.28■■■□□ 2.28
COL13A1-214ENST00000522165 NIM1KQ8IY84 436 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 GMCL1P1Q8NEA9 526 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 PIM2Q9P1W9 311 aa29.28■■■□□ 2.28
COL13A1-214ENST00000522165 HERC5Q9UII4 1024 aaKnown RBP29.28■■■□□ 2.28
COL13A1-214ENST00000522165 TGFB2P61812 414 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 RRP1BQ14684 758 aaKnown RBP29.27■■■□□ 2.28
COL13A1-214ENST00000522165 AK8Q96MA6 479 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 MED15Q96RN5 788 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 GH2P01242 217 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 UBA7P41226 1012 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 ARID5BQ14865 1188 aa29.27■■■□□ 2.28
COL13A1-214ENST00000522165 CLK2P49760 499 aaKnown RBP29.26■■■□□ 2.27
COL13A1-214ENST00000522165 FAM151AQ8WW52 585 aa29.26■■■□□ 2.27
COL13A1-214ENST00000522165 CUL5Q93034 780 aa29.26■■■□□ 2.27
COL13A1-214ENST00000522165 BLZF1Q9H2G9 400 aa29.26■■■□□ 2.27
COL13A1-214ENST00000522165 NFE2L3Q9Y4A8 694 aa29.26■■■□□ 2.27
COL13A1-214ENST00000522165 F5H6K3 240 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 CBFA2T2O43439 604 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 SERPINC1P01008 464 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 UBASH3AP57075 661 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 GSDMDP57764 484 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 KLRC3Q07444 240 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 CUL4BQ13620 913 aa29.25■■■□□ 2.27
COL13A1-214ENST00000522165 SPDYE2Q495Y8 402 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms