RNA–Protein interactions for RNA: ENST00000521129.1

MCPH1-204, Transcript of microcephalin 1, humanhuman

TSL 2

Gene MCPH1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-204ENST00000521129 SHHQ15465 462 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 CHST13Q8NET6 341 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
MCPH1-204ENST00000521129 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
MCPH1-204ENST00000521129 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
MCPH1-204ENST00000521129 SYNRGQ9UMZ2 1314 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 A0A0D9SFI3 127 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 DLL1O00548 723 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 BMP3P12645 472 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 CST5P28325 142 aaPredicted RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 PPARAQ07869 468 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 GMCL1Q96IK5 515 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 FGD4Q96M96 766 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 NAPBQ9H115 298 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
MCPH1-204ENST00000521129 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
MCPH1-204ENST00000521129 PLA2G6O60733 806 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ITGB8P26012 769 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 CHMLP26374 656 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ACLYP53396 1101 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
MCPH1-204ENST00000521129 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
MCPH1-204ENST00000521129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
MCPH1-204ENST00000521129 ELP1O95163 1332 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 FOXP2O15409 715 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 PQBP1O60828 265 aaKnown RBP13.18□□□□□ -0.3
MCPH1-204ENST00000521129 STAT2P52630 851 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 TFAP4Q01664 338 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 KCNA10Q16322 511 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 ZNF697Q5TEC3 545 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 FAM160B2Q86V87 743 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 RUFY2Q8WXA3 655 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
MCPH1-204ENST00000521129 ZNF536O15090 1300 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 VCANP13611 3396 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 CDC45O75419 566 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 RAG1P15918 1043 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 SLC1A4P43007 532 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
MCPH1-204ENST00000521129 GJA9P57773 515 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 NKX3-2P78367 333 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 FAAP100Q0VG06 881 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 CASC1Q6TDU7 716 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 ARMCX2Q7L311 632 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 TMEM39AQ9NV64 488 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
MCPH1-204ENST00000521129 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 RAD50Q92878 1312 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 MYADML2A6NDP7 307 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 ADCY6O43306 1168 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 NOVP48745 357 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 CDK7P50613 346 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 FPGSQ05932 587 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
MCPH1-204ENST00000521129 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
MCPH1-204ENST00000521129 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 SEMA6BQ9H3T3 888 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
MCPH1-204ENST00000521129 IL17RBQ9NRM6 502 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 HOMER2Q9NSB8 354 aa13.16□□□□□ -0.3
MCPH1-204ENST00000521129 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms