RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	DDX20	Q9UHI6	824 aa	Known RBP	4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	FBXL21	Q9UKT6	434 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	AP4E1	Q9UPM8	1137 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	APAF1	O14727	1248 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	FANCG	O15287	622 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	MYB	P10242	640 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ITGA4	P13612	1032 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ID3	Q02535	119 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	LMOD3	Q0VAK6	560 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	TTLL4	Q14679	1199 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	GRM3	Q14832	879 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	LONRF3	Q496Y0	759 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	MINDY4	Q4G0A6	757 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ARHGAP29	Q52LW3	1261 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	FOXR1	Q6PIV2	292 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	CDC37L1	Q7L3B6	337 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	CYB5D2	Q8WUJ1	264 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	CLIP3	Q96DZ5	547 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	ZDHHC15	Q96MV8	337 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	PLA2G2E	Q9NZK7	142 aa		4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	SAP30BP	Q9UHR5	308 aa	Known RBP	4.63	□□□□□ -1.67
SREK1-208	ENST00000520580	TMPRSS2	O15393	492 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	GAS7	O60861	476 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MYL3	P08590	195 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SRGAP2C	P0DJJ0	459 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	DGKG	P49619	791 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	AFF1	P51825	1210 aa	Known RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ZNF445	P59923	1031 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SNW1	Q13573	536 aa	Known RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SLBP	Q14493	270 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	DENND5A	Q6IQ26	1287 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	PGM2L1	Q6PCE3	622 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	C7orf61	Q8IZ16	206 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SPICE1	Q8N0Z3	855 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	VWA5B2	Q8N398	1253 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SMC1B	Q8NDV3	1235 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	PJA1	Q8NG27	643 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	AHCYL2	Q96HN2	611 aa	Known RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SARG	Q9BW04	601 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	PCGF6	Q9BYE7	350 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SLC12A5	Q9H2X9	1139 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ATP13A2	Q9NQ11	1180 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	PRDM11	Q9NQV5	511 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	AAAS	Q9NRG9	546 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	C14orf119	Q9NWQ9	140 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	WDR64	B1ANS9	1081 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MEIS1	O00470	390 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	SOD2	P04179	222 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	TRIM27	P14373	513 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	KCNA6	P17658	529 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MX2	P20592	715 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	GRIK1	P39086	918 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ERVK-21	P61565	698 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	DSG1	Q02413	1049 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MORC1	Q86VD1	984 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	CPA6	Q8N4T0	437 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ARHGEF39	Q8N4T4	335 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	FIBCD1	Q8N539	461 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ZNF507	Q8TCN5	953 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	CHTF18	Q8WVB6	975 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	C1orf159	Q96HA4	380 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	FANCD2OS	Q96PS1	177 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ZNF700	Q9H0M5	742 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	DISC1	Q9NRI5	854 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ATG3	Q9NT62	314 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	MINPP1	Q9UNW1	487 aa		4.62	□□□□□ -1.67
SREK1-208	ENST00000520580	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ADARB2-AS1	A8MUL3	147 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580		B4E1Z4	1266 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	RNGTT	O60942	597 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ALB	P02768	609 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	NEFM	P07197	916 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PURA	Q00577	322 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	FOXD4	Q12950	439 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ELOA3B	Q3SY89	546 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	PKDCC	Q504Y2	493 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	CXorf57	Q6NSI4	855 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	ELOA3	Q8NG57	546 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	RCC1L	Q96I51	464 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	CAMKK2	Q96RR4	588 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	TMX4	Q9H1E5	349 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	NKX2-4	Q9H2Z4	354 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	SSU72	Q9NP77	194 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	GPRC5C	Q9NQ84	441 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	CYP26B1	Q9NR63	512 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	KCNK4	Q9NYG8	393 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	GGA1	Q9UJY5	639 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	SPEF1	Q9Y4P9	236 aa		4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	XPOT	O43592	962 aa	Known RBP	4.61	□□□□□ -1.67
SREK1-208	ENST00000520580	RGS20	O76081	388 aa		4.61	□□□□□ -1.67

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