RNA–Protein interactions for RNA: ENST00000519509.5

CCDC25-204, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-204ENST00000519509 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 UPF3AQ9H1J1 476 aaKnown RBP11.45□□□□□ -0.58
CCDC25-204ENST00000519509 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 GPR108Q9NPR9 543 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 FBXO28Q9NVF7 368 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 DBNLQ9UJU6 430 aaKnown RBP11.45□□□□□ -0.58
CCDC25-204ENST00000519509 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
CCDC25-204ENST00000519509 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 CNPY2Q9Y2B0 182 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 PCDHA11Q9Y5I1 949 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
CCDC25-204ENST00000519509 PI4K2BG5E9Z4 385 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 ARHGEF15O94989 841 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 C6orf222P0C671 652 aaPredicted RBP11.44□□□□□ -0.58
CCDC25-204ENST00000519509 MRE11P49959 708 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 KCTD2Q14681 263 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
CCDC25-204ENST00000519509 MAMDC4Q6UXC1 1216 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 SLC43A3Q8NBI5 491 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 FGD4Q96M96 766 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
CCDC25-204ENST00000519509 DNAJC25-GNG10A0A024R161 153 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 MPHOSPH10O00566 681 aaKnown RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 GJA9P57773 515 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 NKX3-2P78367 333 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 API5Q9BZZ5 524 aaKnown RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 HIPK3Q9H422 1215 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 ZHX1Q9UKY1 873 aaPredicted RBP11.43□□□□□ -0.58
CCDC25-204ENST00000519509 COG5Q9UP83 839 aa11.43□□□□□ -0.58
CCDC25-204ENST00000519509 ASTN1O14525 1302 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 GRIN2DO15399 1336 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 VWA5AO00534 786 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 WDR46O15213 610 aaKnown RBP11.42□□□□□ -0.58
CCDC25-204ENST00000519509 TLR3O15455 904 aaKnown RBP11.42□□□□□ -0.58
CCDC25-204ENST00000519509 IDH1O75874 414 aaKnown RBP11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CA3P07451 260 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CYP2D6P10635 497 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 STAT3P40763 770 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CCL23P55773 120 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 G3BP1Q13283 466 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CCDC158Q5M9N0 1113 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 TMEM179Q6ZVK1 233 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CERS3Q8IU89 383 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
CCDC25-204ENST00000519509 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 CERS4Q9HA82 394 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
CCDC25-204ENST00000519509 MYH4Q9Y623 1939 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 USP34Q70CQ2 3546 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 PRR33A8MZF0 331 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 POLR3DP05423 398 aaPredicted RBP11.41□□□□□ -0.58
CCDC25-204ENST00000519509 GNAI3P08754 354 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 AKR1B1P15121 316 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 SPRED2Q7Z698 418 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
CCDC25-204ENST00000519509 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 RIPK3Q9Y572 518 aa11.41□□□□□ -0.58
CCDC25-204ENST00000519509 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
CCDC25-204ENST00000519509 B4GALT4O60513 344 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 LPXNO60711 386 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 ATP2A2P16615 1042 aaKnown RBP11.4□□□□□ -0.58
CCDC25-204ENST00000519509 BEX3Q00994 111 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 NHLH1Q02575 133 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 ICA1Q05084 483 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 TTLL4Q14679 1199 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 GNASQ5JWF2 1037 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC25-204ENST00000519509 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 HLA-CQ95604 372 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 DYNLL2Q96FJ2 89 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 SCLYQ96I15 445 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 ARHGEF10LQ9HCE6 1279 aa11.4□□□□□ -0.58
CCDC25-204ENST00000519509 TRIOO75962 3097 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.39□□□□□ -0.59
CCDC25-204ENST00000519509 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 CT47B1P0C2W7 299 aaPredicted RBP11.39□□□□□ -0.59
CCDC25-204ENST00000519509 TRIM27P14373 513 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 PTGS1P23219 599 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 COPB2P35606 906 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
CCDC25-204ENST00000519509 TAP1Q03518 808 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 GRB10Q13322 594 aa11.39□□□□□ -0.59
CCDC25-204ENST00000519509 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms