RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 NTSR2O95665 410 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 BCL9O00512 1426 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 TUBBP07437 444 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 DNM2P50570 870 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 USH1GQ495M9 461 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 SLC44A5Q8NCS7 719 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 PSTPIP2Q9H939 334 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 COL14A1Q05707 1796 aaKnown RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 AP5Z1O43299 807 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 KIAA0825Q8IV33 1275 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 EFCAB8A8MWE9 144 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 HS2ST1Q7LGA3 356 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 PIGSQ96S52 555 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 RGPD8O14715 1765 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 HDXQ7Z353 690 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 PCDHA12Q9UN75 941 aa12.55□□□□□ -0.4
PCDHGB4-201ENST00000519479 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 UBE2Q2LH0YL09 131 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 LAD1O00515 517 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 NSUN4Q96CB9 384 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 MROH7-TTC4A0A0A0MT08 1334 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 SOWAHDA6NJG2 315 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 CETN3O15182 167 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 CHMP2AO43633 222 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 CDK8P49336 464 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 CPVLQ9H3G5 476 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 VPS18Q9P253 973 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 SECISBP2LQ93073 1101 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 RPL13P26373 211 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB4-201ENST00000519479 MAGEA1P43355 309 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 TUBGCP2Q9BSJ2 902 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 RWDD2AQ9UIY3 292 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 NCBP1Q09161 790 aaKnown RBP12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 CUL4BQ13620 913 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 PLS1Q14651 629 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 ZYXQ15942 572 aaKnown RBP12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 DPF2Q92785 391 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 COA7Q96BR5 231 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 AK8Q96MA6 479 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 PHLPP2Q6ZVD8 1323 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 B4DLN1 442 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 KRT13P13646 458 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 NF2P35240 595 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 CUEDC2Q9H467 287 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 SERPINB13Q9UIV8 391 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 DNM3Q9UQ16 869 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
PCDHGB4-201ENST00000519479 ORC4O43929 436 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 CCDC172P0C7W6 258 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 CCDC93Q567U6 631 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 USP49Q70CQ1 688 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 SRBD1Q8N5C6 995 aaKnown RBP12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 PSMB7Q99436 277 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 DISC1Q9NRI5 854 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 DDX25Q9UHL0 483 aaKnown RBP12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 BCS1LQ9Y276 419 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 FGFR2P21802 821 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.4
PCDHGB4-201ENST00000519479 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms