RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 TBX2Q13207 712 aaPredicted RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 KRT31Q15323 416 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 MAD2L2Q9UI95 211 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 THRAP3Q9Y2W1 955 aaKnown RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 MNAT1P51948 309 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 COA7Q96BR5 231 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 CHP1Q99653 195 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
DDR1-271ENST00000513240 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 TECP42680 631 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 SATB1Q01826 763 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
DDR1-271ENST00000513240 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 USP21Q9UK80 565 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 CCNT1O60563 726 aaKnown RBP16.47■□□□□ 0.23
DDR1-271ENST00000513240 CACNB3P54284 484 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 ZNF569Q5MCW4 686 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
DDR1-271ENST00000513240 PCNTO95613 3336 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 COL16A1Q07092 1604 aaPredicted RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 SWT1Q5T5J6 900 aaKnown RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 LRRC31Q6UY01 552 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 POLD4Q9HCU8 107 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 PHLPP2Q6ZVD8 1323 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 USP17L5A8MUK1 530 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 DDAH1O94760 285 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 GYPCP04921 128 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 TAL1P17542 331 aaPredicted RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 NAPAP54920 295 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 UBXN1Q04323 297 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 PDXDC2PQ6P474 469 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 GPR161Q8N6U8 529 aaKnown RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 PIGSQ96S52 555 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 SUGCTQ9HAC7 445 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
DDR1-271ENST00000513240 PCDHAC2Q9Y5I4 1007 aa16.46■□□□□ 0.23
DDR1-271ENST00000513240 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
DDR1-271ENST00000513240 TPM1P09493 284 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 SLC16A2P36021 539 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 GTF2IP78347 998 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 CCDC178Q5BJE1 867 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 MFSD14BQ5SR56 506 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 TADA2BQ86TJ2 420 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 EGFL6Q8IUX8 553 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 KAT2BQ92831 832 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
DDR1-271ENST00000513240 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 DACH1Q9UI36 760 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 FCER1AP12319 257 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 UBA7P41226 1012 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 TXKP42681 527 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 EYA3Q99504 573 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
DDR1-271ENST00000513240 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
DDR1-271ENST00000513240 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
DDR1-271ENST00000513240 ENC1O14682 589 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 CALM1P0DP23 149 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 CALM2P0DP24 149 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 CALM3P0DP25 149 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 RASA1P20936 1047 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 SNAP25P60880 206 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 PPP2R3AQ06190 1150 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 CEP95Q96GE4 821 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 SRRTQ9BXP5 876 aaKnown RBP16.44■□□□□ 0.22
DDR1-271ENST00000513240 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 ORC4O43929 436 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 CDK8P49336 464 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 LIG3P49916 1009 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 NAALADL2Q58DX5 795 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 KCNQ5Q9NR82 932 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 KCNJ18B7U540 433 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 ERVK-24P63145 666 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 KCNJ12Q14500 433 aa16.44■□□□□ 0.22
DDR1-271ENST00000513240 TMED8Q6PL24 325 aaPredicted RBP16.44■□□□□ 0.22
DDR1-271ENST00000513240 C4orf32Q8N8J7 132 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms