RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 ARPP21Q9UBL0 812 aaPredicted RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 MORF4L1Q9UBU8 362 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 ADCY3O60266 1144 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 PRDM1O75626 825 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 CNMDO75829 334 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 RASA1P20936 1047 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 MCCP23508 829 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 GRK4P32298 578 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 MCM2P49736 904 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 PRMT2P55345 433 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 ERVK-24P63145 666 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 PTH1RQ03431 593 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
TRIO-213ENST00000509354 SBK1Q52WX2 424 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 VPS53Q5VIR6 699 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
TRIO-213ENST00000509354 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 SPICE1Q8N0Z3 855 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 TTC14Q96N46 770 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRIO-213ENST00000509354 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 SNX14Q9Y5W7 946 aa8.59□□□□□ -1.03
TRIO-213ENST00000509354 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
TRIO-213ENST00000509354 K7ELQ4 463 aaPredicted RBP8.58□□□□□ -1.04
TRIO-213ENST00000509354 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
TRIO-213ENST00000509354 APPP05067 770 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 INHAP05111 366 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 CCL5P13501 91 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 EEF2P13639 858 aaKnown RBP8.58□□□□□ -1.04
TRIO-213ENST00000509354 HOXD10P28358 340 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 USP14P54578 494 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 TRIM32Q13049 653 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 CUL4AQ13619 759 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 Q3C1V9 767 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 MCMDC2Q4G0Z9 681 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 GIMAP6Q6P9H5 292 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 CATSPERGQ6ZRH7 1159 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 ZNF589Q86UQ0 364 aaPredicted RBP8.58□□□□□ -1.04
TRIO-213ENST00000509354 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 COA7Q96BR5 231 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 DSCC1Q9BVC3 393 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 BTBD7Q9P203 1132 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
TRIO-213ENST00000509354 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 MYH6P13533 1939 aa8.58□□□□□ -1.04
TRIO-213ENST00000509354 ZMYM6O95789 1325 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 LAMA2P24043 3122 aaKnown RBP8.57□□□□□ -1.04
TRIO-213ENST00000509354 LCTP09848 1927 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 HOXA2O43364 376 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 GNAT2P19087 354 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 LRRFIP1Q32MZ4 808 aaKnown RBP8.57□□□□□ -1.04
TRIO-213ENST00000509354 FBXL16Q8N461 479 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 GPRC5AQ8NFJ5 357 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 CCDC17Q96LX7 622 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 NUP88Q99567 741 aaPredicted RBP8.57□□□□□ -1.04
TRIO-213ENST00000509354 NAPBQ9H115 298 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 GJD2Q9UKL4 321 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 TMX2Q9Y320 296 aa8.57□□□□□ -1.04
TRIO-213ENST00000509354 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
TRIO-213ENST00000509354 RAD21O60216 631 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 PPARAQ07869 468 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 FUT2Q10981 343 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 IRF5Q13568 498 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 FAM83BQ5T0W9 1011 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 WDR78Q5VTH9 848 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 CREB3L3Q68CJ9 461 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 CLEC17AQ6ZS10 378 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 KIAA1211Q6ZU35 1233 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 GPR142Q7Z601 462 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 HSCBQ8IWL3 235 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 LRRC47Q8N1G4 583 aaKnown RBP8.56□□□□□ -1.04
TRIO-213ENST00000509354 TRIB2Q92519 343 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
TRIO-213ENST00000509354 ATG4CQ96DT6 458 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
TRIO-213ENST00000509354 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 INCENPQ9NQS7 918 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 RABGAP1Q9Y3P9 1069 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms