RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FAM13CQ8NE31 585 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 TMEM87BQ96K49 555 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PRAM1Q96QH2 718 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 MIPEPQ99797 713 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 NT5C1AQ9BXI3 368 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 FOXQ1Q9C009 403 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 ACBD3Q9H3P7 528 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PRDM10Q9NQV6 1147 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PIM2Q9P1W9 311 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 TACC3Q9Y6A5 838 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 ADGRB1O14514 1584 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 KNDC1Q76NI1 1749 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PXDNQ92626 1479 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 AFF2P51816 1311 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 NPHP3Q7Z494 1330 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CHURC1-FNTBB4DL54 471 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CYP26A1O43174 497 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 SLITRK5O94991 958 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CST3P01034 146 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 TNNI2P48788 182 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CYP27A1Q02318 531 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CLCQ05315 142 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 RAD51AP2Q09MP3 1159 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CYP27C1Q4G0S4 372 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 FAM181AQ8N9Y4 354 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 RIN3Q8TB24 985 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 METTL22Q9BUU2 404 aaPredicted RBP5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 LRRC3Q9BY71 257 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 DLC1Q96QB1 1528 aa5.01□□□□□ -1.61
UBE2D3-226ENST00000508635 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 DNAJA2O60884 412 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 JUNBP17275 347 aaPredicted RBP5□□□□□ -1.61
UBE2D3-226ENST00000508635 SAFB2Q14151 953 aaKnown RBP eCLIP5□□□□□ -1.61
UBE2D3-226ENST00000508635 SLC6A19Q695T7 634 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 LETMD1Q6P1Q0 360 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 CDH24Q86UP0 819 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 MCATQ8IVS2 390 aaKnown RBP5□□□□□ -1.61
UBE2D3-226ENST00000508635 MRPL41Q8IXM3 137 aaKnown RBP5□□□□□ -1.61
UBE2D3-226ENST00000508635 MFSD2AQ8NA29 543 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 C8orf37Q96NL8 207 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 POGKQ9P215 609 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 ADAM30Q9UKF2 790 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 TPX2Q9ULW0 747 aaKnown RBP5□□□□□ -1.61
UBE2D3-226ENST00000508635 U3KQE9 123 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 FMN2Q9NZ56 1722 aa5□□□□□ -1.61
UBE2D3-226ENST00000508635 PRR36Q9H6K5 1346 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 COL22A1Q8NFW1 1626 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 EOMESO95936 686 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 ITIH2P19823 946 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 CAP2P40123 477 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 ZNF165P49910 485 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 YARSP54577 528 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 FBXW10Q5XX13 1052 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 ARHGAP27Q6ZUM4 889 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 KRT28Q7Z3Y7 464 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 SLITRK4Q8IW52 837 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 GPRASP2Q96D09 838 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 HEXIM2Q96MH2 286 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 HIRIP3Q9BW71 556 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 TGIF2Q9GZN2 237 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 PPT2Q9UMR5 302 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 INPP5FQ9Y2H2 1132 aa4.99□□□□□ -1.61
UBE2D3-226ENST00000508635 SPATA31A3Q5VYP0 1347 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 CNTNAP4Q9C0A0 1308 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 FOSL1P15407 271 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 RBM6P78332 1123 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 TMEM201Q5SNT2 666 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 FAM214BQ7L5A3 538 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 FERD3LQ96RJ6 166 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 KIF2CQ99661 725 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 CAPN10Q9HC96 672 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 ZC3H7BQ9UGR2 993 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 EFR3BQ9Y2G0 817 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 CDK12Q9NYV4 1490 aaPredicted RBP4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 ADGRB2O60241 1585 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 KIF1AQ12756 1690 aa4.98□□□□□ -1.61
UBE2D3-226ENST00000508635 ANKARQ7Z5J8 1434 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 USP32Q8NFA0 1604 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 BCL9LQ86UU0 1499 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 SBNO1A3KN83 1393 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 SLC22A31A6NKX4 558 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 CBX7O95931 251 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 CPSF6Q16630 551 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 OVOS1Q6IE37 1185 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 CCDC81Q6ZN84 652 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 NFXL1Q6ZNB6 911 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 PLD6Q8N2A8 252 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 BAHD1Q8TBE0 780 aaPredicted RBP4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 PMFBP1Q8TBY8 1022 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 EHMT1Q9H9B1 1298 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 PRDM5Q9NQX1 630 aaPredicted RBP4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 GTF2IRD1Q9UHL9 959 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 TRPC5Q9UL62 973 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms