RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SUSD2Q9UGT4 822 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 PDE6BP35913 854 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 CASP7P55210 303 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 JAG1P78504 1218 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 ADGRF1Q5T601 910 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 HEATR6Q6AI08 1181 aaKnown RBP5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 KIAA1211LQ6NV74 962 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 VHLLQ6RSH7 139 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLCO6A1Q86UG4 719 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 FCRL3Q96P31 734 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 JMJD8Q96S16 334 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 LGR4Q9BXB1 951 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 TNFRSF10DQ9UBN6 386 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 APEX2Q9UBZ4 518 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 STRIP2Q9ULQ0 834 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC12A7Q9Y666 1083 aa5.65□□□□□ -1.5
HMGB1P29-201ENST00000505659 MYOCOSA0A1B0GUC4 107 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 B2RBV5 119 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 VAMP4O75379 141 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 SNX17Q15036 470 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 TCEAL1Q15170 157 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 PKN1Q16512 942 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 ADAT2Q7Z6V5 191 aaKnown RBP5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 IRF2BP1Q8IU81 584 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 CILP2Q8IUL8 1156 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 NAT16Q8N8M0 369 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 MCOLN1Q9GZU1 580 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 WHRNQ9P202 907 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
HMGB1P29-201ENST00000505659 STXBP3O00186 592 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 FGF10O15520 208 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 FGRP09769 529 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 ETFBP38117 255 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 DPY19L1Q2PZI1 675 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 ZNF513Q8N8E2 541 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 SGPP1Q9BX95 441 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 GBP3Q9H0R5 595 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 CGGBP1Q9UFW8 167 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 SF3B6Q9Y3B4 125 aaKnown RBP5.63□□□□□ -1.51
HMGB1P29-201ENST00000505659 ETV2O00321 342 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 TSPAN15O95858 294 aa5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 SSBP05455 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 PRKCAP17252 672 aa5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 LARP1BQ659C4 914 aaKnown RBP5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 C6orf15Q6UXA7 325 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 NUP43Q8NFH3 380 aa5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 MICAL1Q8TDZ2 1067 aa5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P29-201ENST00000505659 A0A087WZG4 1122 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 WTIPA6NIX2 430 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 PNLIPP16233 465 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 DNAJA1P31689 397 aaKnown RBP5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 RAP1GAPP47736 663 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 POU4F1Q01851 419 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 GALNT18Q6P9A2 607 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 ATG14Q6ZNE5 492 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 PTCHD1Q96NR3 888 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 PPP1R16BQ96T49 567 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 ZNF552Q9H707 407 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 ZNF408Q9H9D4 720 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 CRTAC1Q9NQ79 661 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 DIS3Q9Y2L1 958 aaKnown RBP5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 SUGT1Q9Y2Z0 365 aa5.61□□□□□ -1.51
HMGB1P29-201ENST00000505659 A0A1W2PQ45 241 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 A0A1W2PQY0 241 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 OR14I1A6ND48 311 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 DBX1A6NMT0 343 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 NFIBO00712 420 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 AURKAO14965 403 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 PPM1BO75688 479 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 MVKQ03426 396 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 VPS37DQ86XT2 251 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 ARHGEF39Q8N4T4 335 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 KCNN1Q92952 543 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 SLC26A8Q96RN1 970 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 GCM1Q9NP62 436 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 ACTR10Q9NZ32 417 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 ACSL6Q9UKU0 697 aa5.6□□□□□ -1.51
HMGB1P29-201ENST00000505659 ANKRD34BA5PLL1 514 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 NUDT19A8MXV4 375 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 NPIPB6E9PJ23 425 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 TMEM253P0C7T8 217 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 TACR1P25103 407 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 NOP2P46087 812 aaKnown RBP5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 ERVFRD-1P60508 538 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 CYP4F8P98187 520 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 ARID5AQ03989 594 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 FZD5Q13467 585 aa5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 GNL2Q13823 731 aaKnown RBP5.59□□□□□ -1.51
HMGB1P29-201ENST00000505659 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms