RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NAA35Q5VZE5 725 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 IFNL3Q8IZI9 196 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 MB21D1Q8N884 522 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 FANCBQ8NB91 859 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 ACSBG1Q96GR2 724 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 TRIM31Q9BZY9 425 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 TANGO6Q9C0B7 1094 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 BAIAP2L1Q9UHR4 511 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 SLIT1O75093 1534 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 AKAP12Q02952 1782 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 LAMA4Q16363 1823 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 MYH10P35580 1976 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 MEFVO15553 781 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 STAT6P42226 847 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 CLNS1AP54105 237 aaKnown RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 CKAP4Q07065 602 aaKnown RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 NBPF9Q3BBW0 867 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 ZNF654Q8IZM8 581 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 CRACR2BQ8N4Y2 399 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 MARCH10Q8NA82 808 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 UHMK1Q8TAS1 419 aaKnown RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 KRT12Q99456 494 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 IFIH1Q9BYX4 1025 aaKnown RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 EPB41L4AQ9HCS5 686 aaPredicted RBP8.49□□□□□ -1.05
NEDD9-208ENST00000504387 KLC4Q9NSK0 619 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 PIK3C2AO00443 1686 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 ARHGAP23Q9P227 1491 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 RPN1P04843 607 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 NLRP5P59047 1200 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC40Q4G0X9 1142 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 TTC38Q5R3I4 469 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 NAIF1Q69YI7 327 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 POTEDQ86YR6 584 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC13Q8IYE1 715 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CSGALNACT2Q8N6G5 542 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 ZNF473Q8WTR7 871 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CCT8L2Q96SF2 557 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 KCNG1Q9UIX4 513 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CEP131Q9UPN4 1083 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 ZNF263O14978 683 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 OPA1O60313 960 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 HEXIM1O94992 359 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 ADD2P35612 726 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CYLC1P35663 651 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 PAFAH1B1P43034 410 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 NT5DC1Q5TFE4 455 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 MAEAQ7L5Y9 396 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 PNMA8AQ86V59 439 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 THOC1Q96FV9 657 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 TACO1Q9BSH4 297 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 TUBGCP2Q9BSJ2 902 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 SALL4Q9UJQ4 1053 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 RGPD1P0DJD0 1748 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CPDO75976 1380 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 PSMD14O00487 310 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 EPHB6O15197 1021 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 ZFYP08048 801 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 IFNAR1P17181 557 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 NR1D1P20393 614 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 MCM3P25205 808 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 KRT2P35908 639 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 KCNQ4P56696 695 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 KRT83P78385 493 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 RRAGAQ7L523 313 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 ADAT2Q7Z6V5 191 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 LCORLQ8N3X6 602 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
NEDD9-208ENST00000504387 VIPAS39Q9H9C1 493 aa8.48□□□□□ -1.05
NEDD9-208ENST00000504387 CRYBG1Q9Y4K1 1723 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 ZNF233A6NK53 670 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 PHF20L1A8MW92 1017 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 DEXIO95424 95 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 STARD3NLO95772 234 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 CPP00450 1065 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 BCAMP50895 628 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 FAM47AQ5JRC9 791 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC121Q6ZUS5 278 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 SMIM5Q71RC9 77 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 WASF1Q92558 559 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 STRBPQ96SI9 672 aaKnown RBP8.47□□□□□ -1.05
NEDD9-208ENST00000504387 SLC40A1Q9NP59 571 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 WTIPA6NIX2 430 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TACC1O75410 805 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 FCER1AP12319 257 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 ELF1P32519 619 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 EIF4A3P38919 411 aaKnown RBP8.47□□□□□ -1.05
NEDD9-208ENST00000504387 VAV2P52735 878 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 EHHADHQ08426 723 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms