RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 FAM204AQ9H8W3 233 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 NT5C2P49902 561 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 MAIP1Q8WWC4 291 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 AZI2Q9H6S1 392 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 M0R2C6 588 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 PARP2Q9UGN5 583 aa17.83■□□□□ 0.44
HMGXB3-202ENST00000503427 TCP1P17987 556 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 ARL1P40616 181 aaPredicted RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 NLRX1Q86UT6 975 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 CCDC105Q8IYK2 499 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 CSADQ9Y600 493 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 HARSP12081 509 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 RAD51AP2Q09MP3 1159 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 CDAN1Q8IWY9 1227 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 LSM14BQ9BX40 385 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 AMFRQ9UKV5 643 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 CCDC160A6NGH7 325 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 IKBKBO14920 756 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 GAS7O60861 476 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 CIB2O75838 187 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 KRT71Q3SY84 523 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 GPATCH4Q5T3I0 446 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 NSUN7Q8NE18 718 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 RAB3IL1Q8TBN0 382 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 BSDC1Q9NW68 430 aaPredicted RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 NDC80O14777 642 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 LONP1P36776 959 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 TRPC3Q13507 836 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 PCDHA5Q9Y5H7 936 aa17.82■□□□□ 0.44
HMGXB3-202ENST00000503427 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 OR52Z1P0C646 297 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 STAT1P42224 750 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 SLFN12Q8IYM2 578 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 GSDMAQ96QA5 445 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 DDX39AO00148 427 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 GPIHBP1Q8IV16 184 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 RPN1P04843 607 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 IWS1Q96ST2 819 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 RABEP2Q9H5N1 569 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
HMGXB3-202ENST00000503427 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 GNPTABQ3T906 1256 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 FAM182BQ5T319 152 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 FOXP1Q9H334 677 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 EPN1Q9Y6I3 576 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 RPAP1Q9BWH6 1393 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 FOSP01100 380 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 NAA25Q14CX7 972 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 ABCB5Q2M3G0 1257 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 ASPRV1Q53RT3 343 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 TMED8Q6PL24 325 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 MED4Q9NPJ6 270 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 RCOR1Q9UKL0 485 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 PCDHA12Q9UN75 941 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 IGKV5-2P06315 115 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 GRAPQ13588 217 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 DENND2CQ68D51 928 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 PPP1R13BQ96KQ4 1090 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 GOLGA8KD6RF30 607 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 E7EVH7 732 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 POLR2MP0CAP2 368 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 MCF2L2Q86YR7 1114 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 SYMPKQ92797 1274 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 GDAP1L1Q96MZ0 367 aa17.8■□□□□ 0.44
HMGXB3-202ENST00000503427 PRKG1Q13976 671 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 VSIG1Q86XK7 387 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 TECP42680 631 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 PTGDRQ13258 359 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 GAS8O95995 478 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 OTUD6AQ7L8S5 288 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 FMNL1O95466 1100 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 MAEAQ7L5Y9 396 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
HMGXB3-202ENST00000503427 ATP8B1O43520 1251 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 PSMC4P43686 418 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 SNX16P57768 344 aa17.78■□□□□ 0.44
HMGXB3-202ENST00000503427 NEDD9Q14511 834 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms