RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 N4BP2L2Q92802 583 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 KRT12Q99456 494 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 NCAPGQ9BPX3 1015 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 AMFRQ9UKV5 643 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 B4DLN1 442 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 GGCXP38435 758 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 TRAF1Q13077 416 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 FAM13AO94988 1023 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 KLHL14Q9P2G3 628 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 STK38LQ9Y2H1 464 aa18.99■□□□□ 0.63
HMGXB3-201ENST00000502717 CCDC160A6NGH7 325 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 HMGB1P1B2RPK0 211 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 SPOPO43791 374 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 PDE6AP16499 860 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 IFNAR1P17181 557 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 E2F5Q15329 346 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 CEP152O94986 1710 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 M0R2C6 588 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 TRAPPC10P48553 1259 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 RNF26Q9BY78 433 aaPredicted RBP18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 PPARAQ07869 468 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 FAM98CQ17RN3 349 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 VIPAS39Q9H9C1 493 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 MAGEF1Q9HAY2 307 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 ANO9A1A5B4 782 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 ANKRD13CQ8N6S4 541 aa18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 CNOT6LQ96LI5 555 aaKnown RBP18.98■□□□□ 0.63
HMGXB3-201ENST00000502717 KRT31Q15323 416 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 PARP10Q53GL7 1025 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 DENND2AQ9ULE3 1009 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 TMEM94Q12767 1356 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 CALUO43852 315 aaPredicted RBP18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 CIAO1O76071 339 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 PLA2G4AP47712 749 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 RPSAP08865 295 aaKnown RBP18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 SF3A3Q12874 501 aaKnown RBP eCLIP18.97■□□□□ 0.632e-10■■■■□ 21
HMGXB3-201ENST00000502717 BLIDQ8IZY5 108 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 SNX29Q8TEQ0 813 aa18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 LSM14BQ9BX40 385 aaKnown RBP18.97■□□□□ 0.63
HMGXB3-201ENST00000502717 SH2B2O14492 632 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 CIB2O75838 187 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 USP14P54578 494 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 LRRC24Q50LG9 513 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 ABHD10Q9NUJ1 306 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 FHOD1Q9Y613 1164 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 ARID4AP29374 1257 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 RASSF7Q02833 373 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 GLE1Q53GS7 698 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 PDE8AO60658 829 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 PTPREP23469 700 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 EHHADHQ08426 723 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 FLAD1Q8NFF5 587 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 COG1Q8WTW3 980 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 PAGE5Q96GU1 130 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 HGSO14964 777 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 PTPN12Q05209 780 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 HERC4Q5GLZ8 1057 aaPredicted RBP18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 ARHGAP24Q8N264 748 aa18.96■□□□□ 0.63
HMGXB3-201ENST00000502717 STX2P32856 288 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 RBBP5Q15291 538 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 TCP11X2Q5H9J9 407 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 LZTS2Q9BRK4 669 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 CUEDC2Q9H467 287 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 CNOT10Q9H9A5 744 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 TNKSO95271 1327 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 COBLO75128 1261 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ERCC3P19447 782 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 PDCLQ13371 301 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ARHGEF2Q92974 986 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 MCUR1Q96AQ8 359 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ZSCAN10Q96SZ4 725 aaPredicted RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 FRMD4BQ9Y2L6 1034 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 MYL1P05976 194 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 PEX19P40855 299 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 VSNL1P62760 191 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ZNF804AQ7Z570 1209 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 CCDC105Q8IYK2 499 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 THAP9Q9H5L6 903 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 MROH5Q6ZUA9 1318 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 KIF1CO43896 1103 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 ATP2A2P16615 1042 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 DNAJC10Q8IXB1 793 aa18.95■□□□□ 0.62
HMGXB3-201ENST00000502717 GUCY2CP25092 1073 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 MRPL12P52815 198 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 RBM43Q6ZSC3 357 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 AIFM3Q96NN9 605 aa18.94■□□□□ 0.62
HMGXB3-201ENST00000502717 FAM114A2Q9NRY5 505 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms