RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	KIF23	Q02241	960 aa	Predicted RBP	14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	PPIL2	Q13356	520 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	CST9	Q5W186	159 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	WWC2	Q6AWC2	1192 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	TYW1B	Q6NUM6	668 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	FAM160B2	Q86V87	743 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	RBM46	Q8TBY0	533 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	RRP36	Q96EU6	259 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	PHF20	Q9BVI0	1012 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	ELP3	Q9H9T3	547 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	GPBP1L1	Q9HC44	474 aa	Predicted RBP	14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	SH3GLB2	Q9NR46	395 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	BARHL2	Q9NY43	387 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	FEM1B	Q9UK73	627 aa		14.03	□□□□□ -0.16
MATR3-231	ENST00000502394	TRPM7	Q96QT4	1865 aa		14.02	□□□□□ -0.16
MATR3-231	ENST00000502394	LOC285556	D6RIA3	1793 aa		14.02	□□□□□ -0.16
MATR3-231	ENST00000502394		A0A0G2JLL6	359 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	PNMA6F	A0A0J9YX94	578 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	TRIM75P	A6NK02	468 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394		H3BQV1	296 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	hCG_1984214	I3L0E3	225 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	STXBP3	O00186	592 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	CXCL11	O14625	94 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	ZBTB5	O15062	677 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	RAD21	O60216	631 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	PPP1R11	O60927	126 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	CELF2	O95319	508 aa	Known RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	MMP1	P03956	469 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	GJA5	P36382	358 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	STAT2	P52630	851 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	TTLL12	Q14166	644 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	IFFO2	Q5TF58	517 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	PRRT2	Q7Z6L0	340 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	ZNF713	Q8N859	430 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	CHURC1	Q8WUH1	139 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	RTN4	Q9NQC3	1192 aa	Known RBP	14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	VPS54	Q9P1Q0	977 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	PRR12	Q9ULL5	1215 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	RLF	Q13129	1914 aa		14.02	□□□□□ -0.17
MATR3-231	ENST00000502394	KIF28P	B7ZC32	967 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	IRF6	O14896	467 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	U2AF2	P26368	475 aa	Known RBP eCLIP	14.01	□□□□□ -0.17	1e-17	■□□□□ 9.9
MATR3-231	ENST00000502394	HMGCS2	P54868	508 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	MOGS	Q13724	837 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	CDC37	Q16543	378 aa	Predicted RBP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	QRICH1	Q2TAL8	776 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	FOXD4L5	Q5VV16	416 aa	Predicted RBP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	TMEM92	Q6UXU6	159 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	DAGLB	Q8NCG7	672 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	PIBF1	Q8WXW3	757 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	RANBP17	Q9H2T7	1088 aa	Known RBP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	ZNF408	Q9H9D4	720 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	VAT1L	Q9HCJ6	419 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	FBXO28	Q9NVF7	368 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	KCNJ14	Q9UNX9	436 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	PARP14	Q460N5	1801 aa		14.01	□□□□□ -0.17
MATR3-231	ENST00000502394	ESYT2	A0FGR8	921 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	XBP1	P17861	261 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	PPP1R18	Q6NYC8	613 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	FERMT3	Q86UX7	667 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	HOMER1	Q86YM7	354 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	C2orf69	Q8N8R5	385 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	TNFRSF25	Q93038	417 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	OPTN	Q96CV9	577 aa		14	□□□□□ -0.17
MATR3-231	ENST00000502394	RPAP3	Q9H6T3	665 aa	Predicted RBP	14	□□□□□ -0.17
MATR3-231	ENST00000502394	SEC63	Q9UGP8	760 aa	Known RBP	14	□□□□□ -0.17
MATR3-231	ENST00000502394		M0R2N6	131 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	BAG4	O95429	457 aa	Known RBP	13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	TRIM29	Q14134	588 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	CATSPERG	Q6ZRH7	1159 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	HEATR3	Q7Z4Q2	680 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	DIS3L2	Q8IYB7	885 aa	Known RBP	13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	CCDC148	Q8NFR7	591 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	OXER1	Q8TDS5	423 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	WNK4	Q96J92	1243 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	SLF1	Q9BQI6	1058 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	ZMYND12	Q9H0C1	365 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	FOXP1	Q9H334	677 aa	Predicted RBP	13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	TMOD4	Q9NZQ9	345 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	PPP1R9A	Q9ULJ8	1098 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	ISY1	Q9ULR0	285 aa	Known RBP	13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	ADAMTS5	Q9UNA0	930 aa		13.99	□□□□□ -0.17
MATR3-231	ENST00000502394	MYPN	Q86TC9	1320 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	BTBD18	B2RXH4	712 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	ADAMTS3	O15072	1205 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	HOXA7	P31268	230 aa	Predicted RBP	13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	GALNT17	Q6IS24	598 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	BRAP	Q7Z569	592 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	PRPF38A	Q8NAV1	312 aa	Known RBP	13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	REPS2	Q8NFH8	660 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	COA7	Q96BR5	231 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	SLC10A4	Q96EP9	437 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	CHAMP1	Q96JM3	812 aa		13.98	□□□□□ -0.17
MATR3-231	ENST00000502394	ZNF536	O15090	1300 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L15	C9J2P7	530 aa		13.97	□□□□□ -0.17
MATR3-231	ENST00000502394	USP17L13	C9JLJ4	530 aa		13.97	□□□□□ -0.17

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