RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 PCDHB13Q9Y5F0 798 aa6.46□□□□□ -1.37
SOX2-OT-218ENST00000498731 ENC1O14682 589 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 IGHMBP2P38935 993 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZAP70P43403 619 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 AKAP17AQ02040 695 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 LAMB3Q13751 1172 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC4A8Q2Y0W8 1093 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 RRP12Q5JTH9 1297 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 RAD9BQ6WBX8 426 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 LRP10Q7Z4F1 713 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 PDILTQ8N807 584 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 C1orf131Q8NDD1 294 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 HDAC7Q8WUI4 952 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 IL17RAQ96F46 866 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 CAPS2Q9BXY5 557 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 OSBPL7Q9BZF2 842 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 VCPKMTQ9H867 229 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 GOPCQ9HD26 462 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 ATP6V1DQ9Y5K8 247 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 SPDYE5A6NIY4 337 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 FMNL1O95466 1100 aaPredicted RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 MYL1P05976 194 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 TGFB3P10600 412 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 CDC27P30260 824 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 GBP2P32456 591 aaPredicted RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 PDAP1Q13442 181 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 PALB2Q86YC2 1186 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 CCDC150Q8NCX0 1101 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 SAAL1Q96ER3 474 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 FAM210AQ96ND0 272 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 USP28Q96RU2 1077 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 CENPOQ9BU64 300 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 PHACTR1Q9C0D0 580 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 RMI1Q9H9A7 625 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 STK32BQ9NY57 414 aa6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 CCNL1Q9UK58 526 aaPredicted RBP6.46□□□□□ -1.38
SOX2-OT-218ENST00000498731 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 NDUFAB1O14561 156 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 NRDCO43847 1150 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 SMNDC1O75940 238 aaKnown RBP eCLIP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 RTN3O95197 1032 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 ABCD1P33897 745 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 USP8P40818 1118 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 RFX5P48382 616 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 NDUFA8P51970 172 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 CTSWP56202 376 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 RESTQ13127 1097 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 QPCTQ16769 361 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 KANK3Q6NY19 840 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 TC2NQ8N9U0 490 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 RASSF8Q8NHQ8 419 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 MTRQ99707 1265 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 TRPM3Q9HCF6 1732 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 PCCAP05165 728 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 ATP5JP18859 108 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 SERPINB4P48594 390 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 AARSP49588 968 aaKnown RBP eCLIP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 TTC39BQ5VTQ0 682 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 MIGA2Q7L4E1 593 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC35F6Q8N357 371 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 TSEN2Q8NCE0 465 aaKnown RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 TTLL11Q8NHH1 800 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 PCMTD1Q96MG8 357 aaPredicted RBP6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 ISCA1Q9BUE6 129 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 PALLDQ8WX93 1383 aa6.45□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC27A2O14975 620 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PDE8AO60658 829 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PSMA5P28066 241 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CNGA1P29973 690 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SMTNP53814 917 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 FAM160A1Q05DH4 1040 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SCARF1Q14162 830 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 MCMDC2Q4G0Z9 681 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZNF569Q5MCW4 686 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PPP1R15BQ5SWA1 713 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 NAA35Q5VZE5 725 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 USPL1Q5W0Q7 1092 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ATG9AQ7Z3C6 839 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PHC3Q8NDX5 983 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ACRBPQ8NEB7 543 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 TANGO6Q9C0B7 1094 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 IMPACTQ9P2X3 320 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZNF652Q9Y2D9 606 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 AOX1Q06278 1338 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 DPYSL4O14531 572 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PFKFB2O60825 505 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PPFIA2O75334 1257 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 GNAT1P11488 350 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 RFC4P35249 363 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 IL6STP40189 918 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 PDE4BQ07343 736 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 RBBP5Q15291 538 aaKnown RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC9C2Q5TAH2 1124 aa6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 CAPRIN2Q6IMN6 1127 aaKnown RBP6.44□□□□□ -1.38
SOX2-OT-218ENST00000498731 BRF1Q92994 677 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms