RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 GABPAQ06546 454 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CPLX2Q6PUV4 134 aaKnown RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 CRIPAKQ8N1N5 446 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 MAP3K14Q99558 947 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 OSBPL5Q9H0X9 879 aaPredicted RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 EHD4Q9H223 541 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 SENP2Q9HC62 589 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 NCOA5Q9HCD5 579 aaKnown RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 SWAP70Q9UH65 585 aa8.92□□□□□ -0.98
CDC42-205ENST00000498236 NOVA2Q9UNW9 492 aaKnown RBP8.92□□□□□ -0.98
CDC42-205ENST00000498236 PLIN4Q96Q06 1357 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 STK36Q9NRP7 1315 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 CPLX1O14810 134 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 PRDM1O75626 825 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 DDAH1O94760 285 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 F13A1P00488 732 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 FDPSP14324 419 aaKnown RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 IFNAR1P17181 557 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 NOVP48745 357 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 CDK8P49336 464 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 NTRK3Q16288 839 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 CRTC2Q53ET0 693 aaPredicted RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 IFIT1BQ5T764 474 aaKnown RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 FKBP1CQ5VVH2 108 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 ZNF654Q8IZM8 581 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 JDP2Q8WYK2 163 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 KCTD15Q96SI1 283 aaPredicted RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 MKNK2Q9HBH9 465 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 PPP1R1BQ9UD71 204 aaPredicted RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 SAP30BPQ9UHR5 308 aaKnown RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 HDAC9Q9UKV0 1011 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 ZMIZ1Q9ULJ6 1067 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 NAP1L2Q9ULW6 460 aaPredicted RBP8.91□□□□□ -0.98
CDC42-205ENST00000498236 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 ECM29Q5VYK3 1845 aa8.91□□□□□ -0.98
CDC42-205ENST00000498236 MYH1P12882 1939 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ATRNL1Q5VV63 1379 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 CARNS1A5YM72 827 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 TSPY2A6NKD2 308 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 GOLGA8AA7E2F4 631 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ENTPD3O75355 529 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 RAD17O75943 681 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 HLA-DOAP06340 250 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 RPS12P25398 132 aaKnown RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 CDC27P30260 824 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 ATP1A2P50993 1020 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 TFAP4Q01664 338 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 CXCL9Q07325 125 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 TROAPQ12815 778 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 PTK7Q13308 1070 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 TNIP1Q15025 636 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 RTN1Q16799 776 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 CFAP100Q494V2 611 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 CIAPIN1Q6FI81 312 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 RCSD1Q6JBY9 416 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 VASH1Q7L8A9 365 aaPredicted RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 CATIPQ7Z7H3 387 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 METTL16Q86W50 562 aaKnown RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ZNF444Q8N0Y2 327 aaPredicted RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 STK11IPQ8N1F8 1099 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 OGFOD1Q8N543 542 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 FANCBQ8NB91 859 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 NEDD1Q8NHV4 660 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 DYNLL2Q96FJ2 89 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ZBED3Q96IU2 234 aaPredicted RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 ZKSCAN3Q9BRR0 538 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ZSCAN16Q9H4T2 348 aaPredicted RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 IL17RBQ9NRM6 502 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 RBM28Q9NW13 759 aaKnown RBP8.9□□□□□ -0.98
CDC42-205ENST00000498236 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 ADAMTSL1Q8N6G6 1762 aa8.9□□□□□ -0.98
CDC42-205ENST00000498236 FZD9O00144 591 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 TSPY3P0CV98 308 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 TSPY8P0CW00 308 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 RBM5P52756 815 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42-205ENST00000498236 ZNF280AP59817 542 aaPredicted RBP8.89□□□□□ -0.99
CDC42-205ENST00000498236 NFIAQ12857 509 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 PICALMQ13492 652 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 SKOR2Q2VWA4 1001 aaPredicted RBP8.89□□□□□ -0.99
CDC42-205ENST00000498236 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 TMEM164Q5U3C3 297 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 CDC37L1Q7L3B6 337 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 TMEM87AQ8NBN3 555 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 NLGN2Q8NFZ4 835 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 STK32AQ8WU08 396 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 DDX11Q96FC9 970 aa8.89□□□□□ -0.99
CDC42-205ENST00000498236 PRMT6Q96LA8 375 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms