RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 ATG4CQ96DT6 458 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 SPATC1LQ9H0A9 340 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 EHD4Q9H223 541 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 ADGRG1Q9Y653 693 aa8.43□□□□□ -1.06
CHCHD3-206ENST00000496427 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 RCCD1A6NED2 376 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 SMIM22K7EJ46 135 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 SMAD3P84022 425 aaKnown RBP8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 TLE2Q04725 743 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 SNX17Q15036 470 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 SSH3Q8TE77 659 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 EAF2Q96CJ1 260 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 MAML3Q96JK9 1138 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 ZNF512BQ96KM6 892 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 RNPC3Q96LT9 517 aaKnown RBP8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 RIOK1Q9BRS2 568 aaKnown RBP8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 PRDM6Q9NQX0 595 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 PTPRSQ13332 1948 aa8.42□□□□□ -1.06
CHCHD3-206ENST00000496427 REV3LO60673 3130 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 PQBP1O60828 265 aaKnown RBP8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 PGK1P00558 417 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 POLR3DP05423 398 aaPredicted RBP8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 PGK2P07205 417 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 TAL1P17542 331 aaPredicted RBP8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 ATP8B2P98198 1209 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 GABPAQ06546 454 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 LCORLQ8N3X6 602 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 SDR42E1Q8WUS8 393 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 DYNLL2Q96FJ2 89 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 MCM9Q9NXL9 1143 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 RAPGEFL1Q9UHV5 662 aa8.41□□□□□ -1.06
CHCHD3-206ENST00000496427 COL4A4P53420 1690 aaPredicted RBP8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 FLOT1O75955 427 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 CLTBP09497 229 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 AKR1B1P15121 316 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 MAP3K12Q12852 859 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 COG2Q14746 738 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 TMEM132BQ14DG7 1078 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 SLFNL1Q499Z3 407 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 SHCBP1Q8NEM2 672 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 PPM1EQ8WY54 764 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 XPNPEP3Q9NQH7 507 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 FBXO28Q9NVF7 368 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 EXOC6BQ9Y2D4 811 aa8.4□□□□□ -1.06
CHCHD3-206ENST00000496427 TANC1Q9C0D5 1861 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 ZNF532Q9HCE3 1301 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 IPO8O15397 1037 aaKnown RBP8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 STRNO43815 780 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 RARBP10826 455 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 RAG1P15918 1043 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 PDE6AP16499 860 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 RPIAP49247 311 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 ICA1Q05084 483 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 AACSQ86V21 672 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 SCUBE3Q8IX30 993 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 MMP19Q99542 508 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 CRNKL1Q9BZJ0 848 aaKnown RBP8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 BCL11AQ9H165 835 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 IL1RAPL2Q9NP60 686 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 HOXC10Q9NYD6 342 aa8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 NOP58Q9Y2X3 529 aaKnown RBP8.39□□□□□ -1.07
CHCHD3-206ENST00000496427 ROBO3Q96MS0 1386 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 SYNRGQ9UMZ2 1314 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 MYADML2A6NDP7 307 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 GRXCR1A8MXD5 290 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 KIAA0355O15063 1070 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 PRKAB2O43741 272 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 RAD21O60216 631 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 CHGBP05060 677 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 RLBP1P12271 317 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 FCER1AP12319 257 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 FPGSQ05932 587 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 C1orf53Q5VUE5 145 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 ZKSCAN2Q63HK3 967 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 TMEM179Q6ZVK1 233 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 CERS3Q8IU89 383 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 SIAH1Q8IUQ4 282 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 ITPRIPQ8IWB1 547 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 MB21D1Q8N884 522 aa8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
CHCHD3-206ENST00000496427 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.38□□□□□ -1.077e-16■□□□□ 10.3
CHCHD3-206ENST00000496427 TINF2Q9BSI4 451 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms