RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GRK4P32298 578 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 MAP2K5Q13163 448 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 Q6ZUG5 572 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 ABRAQ8N0Z2 381 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 PXYLP1Q8TE99 480 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 SH3TC2Q8TF17 1288 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 TM6SF1Q9BZW5 370 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
COL1A1-208ENST00000494334 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-208ENST00000494334 FCER1AP12319 257 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 XRCC5P13010 732 aaKnown RBP15.78■□□□□ 0.12
COL1A1-208ENST00000494334 TAL1P17542 331 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-208ENST00000494334 RXRAP19793 462 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 ADORA2AP29274 412 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 RGS2P41220 211 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 SLC9C1Q4G0N8 1177 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 RAB11FIP4Q86YS3 637 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 FBXL16Q8N461 479 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 CHST13Q8NET6 341 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 ARMC5Q96C12 935 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 MMP19Q99542 508 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 JMJD4Q9H9V9 463 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 BRPF3Q9ULD4 1205 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 CCPG1Q9ULG6 757 aa15.78■□□□□ 0.12
COL1A1-208ENST00000494334 COBLO75128 1261 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 HOXC6P09630 235 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CALM1P0DP23 149 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CALM2P0DP24 149 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CALM3P0DP25 149 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 ALAS1P13196 640 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 ELNP15502 786 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 ANAPC15P60006 121 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 FGD1P98174 961 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CDC37Q16543 378 aaPredicted RBP15.77■□□□□ 0.12
COL1A1-208ENST00000494334 SLC35G1Q2M3R5 365 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 TKFCQ3LXA3 575 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 APOA5Q6Q788 366 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 SYNE3Q6ZMZ3 975 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CTCFLQ8NI51 663 aaPredicted RBP15.77■□□□□ 0.12
COL1A1-208ENST00000494334 NPLOC4Q8TAT6 608 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 AGXT2Q9BYV1 514 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 RIOX1Q9H6W3 641 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 FBXO40Q9UH90 709 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CYP46A1Q9Y6A2 500 aa15.77■□□□□ 0.12
COL1A1-208ENST00000494334 CYTH3O43739 400 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 DHX16O60231 1041 aaKnown RBP15.76■□□□□ 0.11
COL1A1-208ENST00000494334 KIF5BP33176 963 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 KCTD2Q14681 263 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 CCL14Q16627 93 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 QRICH1Q2TAL8 776 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 MUM1L1Q5H9M0 696 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 DPP9Q86TI2 863 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 CCDC144CPQ8IYA2 1237 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 FANCBQ8NB91 859 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 TRIB2Q92519 343 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 BRF1Q92994 677 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 MTMR8Q96EF0 704 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 ZNF333Q96JL9 665 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 APBA2Q99767 749 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 UPF3BQ9BZI7 483 aaKnown RBP15.76■□□□□ 0.11
COL1A1-208ENST00000494334 ACAD9Q9H845 621 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 RNF146Q9NTX7 359 aa15.76■□□□□ 0.11
COL1A1-208ENST00000494334 PLXNB2O15031 1838 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 KLF18A0A0U1RQI7 1052 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 PGK2P07205 417 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 APOBRQ0VD83 1088 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 FLRT1Q9NZU1 646 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 BIN2Q9UBW5 565 aaPredicted RBP15.75■□□□□ 0.11
COL1A1-208ENST00000494334 PNMA2Q9UL42 364 aa15.75■□□□□ 0.11
COL1A1-208ENST00000494334 CCDC85CA6NKD9 419 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 ZBTB5O15062 677 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 ZBTB43O43298 467 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 HMGCRP04035 888 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 INHAP05111 366 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 GNAQP50148 359 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 TRIM32Q13049 653 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 TOB2Q14106 344 aaPredicted RBP15.74■□□□□ 0.11
COL1A1-208ENST00000494334 ZNF792Q3KQV3 632 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 TRMT44Q8IYL2 757 aaKnown RBP15.74■□□□□ 0.11
COL1A1-208ENST00000494334 CMTR1Q8N1G2 835 aaKnown RBP15.74■□□□□ 0.11
COL1A1-208ENST00000494334 SRBD1Q8N5C6 995 aaKnown RBP15.74■□□□□ 0.11
COL1A1-208ENST00000494334 DDX11Q96FC9 970 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 PIGSQ96S52 555 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 LZTS2Q9BRK4 669 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 PDRG1Q9NUG6 133 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 SLC5A4Q9NY91 659 aa15.74■□□□□ 0.11
COL1A1-208ENST00000494334 DNAJC25-GNG10A0A024R161 153 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 MYCP01106 439 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms