RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TCP11L1Q9NUJ3 509 aa16.52■□□□□ 0.24
VTI1A-206ENST00000489142 DIS3Q9Y2L1 958 aaKnown RBP16.52■□□□□ 0.24
VTI1A-206ENST00000489142 RANBP2P49792 3224 aaKnown RBP16.52■□□□□ 0.23
VTI1A-206ENST00000489142 DNAJC25-GNG10A0A024R161 153 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 KDM4AO75164 1064 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 OAZ1P54368 228 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 FGD4Q96M96 766 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
VTI1A-206ENST00000489142 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
VTI1A-206ENST00000489142 DDX49Q9Y6V7 483 aaKnown RBP16.51■□□□□ 0.23
VTI1A-206ENST00000489142 DNM1LO00429 736 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 PLA2G6O60733 806 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
VTI1A-206ENST00000489142 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
VTI1A-206ENST00000489142 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 MUM1L1Q5H9M0 696 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 CHST13Q8NET6 341 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 ESR2Q92731 530 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 TRERF1Q96PN7 1200 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 FBXO40Q9UH90 709 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 ZHX1Q9UKY1 873 aaPredicted RBP16.5■□□□□ 0.23
VTI1A-206ENST00000489142 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
VTI1A-206ENST00000489142 LRRC37A2A6NM11 1700 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 PGK1P00558 417 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 GOLGA8HP0CJ92 632 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 FDX1P10109 184 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 PDHBP11177 359 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 PCP11498 1178 aaKnown RBP16.49■□□□□ 0.23
VTI1A-206ENST00000489142 CHMLP26374 656 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
VTI1A-206ENST00000489142 LRRC41Q15345 812 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
VTI1A-206ENST00000489142 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 FERMT2Q96AC1 680 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
VTI1A-206ENST00000489142 CNPY2Q9Y2B0 182 aa16.49■□□□□ 0.23
VTI1A-206ENST00000489142 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 RARBP10826 455 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 PTH1RQ03431 593 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.48■□□□□ 0.23
VTI1A-206ENST00000489142 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
VTI1A-206ENST00000489142 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
VTI1A-206ENST00000489142 PRO3102Q9H379 93 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 XPNPEP3Q9NQH7 507 aa16.48■□□□□ 0.23
VTI1A-206ENST00000489142 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 SOWAHBA6NEL2 793 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 ADCY6O43306 1168 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 AKR1A1P14550 325 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 ADCYAP1R1P41586 468 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 MAMDC4Q6UXC1 1216 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 BTNL9Q6UXG8 535 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 NSMFQ6X4W1 530 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 TTC14Q96N46 770 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
VTI1A-206ENST00000489142 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 NRBP1Q9UHY1 535 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 CTNNA3Q9UI47 895 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 MYH6P13533 1939 aa16.47■□□□□ 0.23
VTI1A-206ENST00000489142 RAD50Q92878 1312 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ICAM1P05362 532 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 RTP1P59025 263 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 IQCA1Q86XH1 822 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 MSL3Q8N5Y2 521 aaKnown RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 PNMA1Q8ND90 353 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ZSCAN10Q96SZ4 725 aaPredicted RBP16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ATP11BQ9Y2G3 1177 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
VTI1A-206ENST00000489142 ASTN1O14525 1302 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 TNKSO95271 1327 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 NFIBO00712 420 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 ACVR2BQ13705 512 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 TKFCQ3LXA3 575 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
VTI1A-206ENST00000489142 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 PTGS1P23219 599 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 MDM2Q00987 491 aaPredicted RBP16.44■□□□□ 0.22
VTI1A-206ENST00000489142 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 TRIM60Q495X7 471 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 SLC39A5Q6ZMH5 540 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 GDF15Q99988 308 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 KRT23Q9C075 422 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms