RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 COL6A1P12109 1028 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 MAMDC4Q6UXC1 1216 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 ARRDC4Q8NCT1 418 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 ZKSCAN3Q9BRR0 538 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
ATG3-205ENST00000488910 CEP290O15078 2479 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 SYNGAP1Q96PV0 1343 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 ZNF543Q08ER8 600 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 GPATCH4Q5T3I0 446 aaKnown RBP20.52■□□□□ 0.88
ATG3-205ENST00000488910 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 CCDC174Q6PII3 467 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 RASGRP2Q7LDG7 609 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 ZSCAN10Q96SZ4 725 aaPredicted RBP20.52■□□□□ 0.88
ATG3-205ENST00000488910 RANBP17Q9H2T7 1088 aaKnown RBP20.52■□□□□ 0.88
ATG3-205ENST00000488910 GPCPD1Q9NPB8 672 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 HOMER2Q9NSB8 354 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 RNF146Q9NTX7 359 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 CNPY2Q9Y2B0 182 aa20.52■□□□□ 0.88
ATG3-205ENST00000488910 FRMPD3Q5JV73 1810 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 DNM1LO00429 736 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 ICAM1P05362 532 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 SLC16A2P36021 539 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 PTH1RQ03431 593 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 PFASO15067 1338 aa20.51■□□□□ 0.87
ATG3-205ENST00000488910 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
ATG3-205ENST00000488910 SMCHD1A6NHR9 2005 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 ALAS1P13196 640 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 SNAP25P60880 206 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 TRDNQ13061 729 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 PNMA1Q8ND90 353 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 UBAC1Q9BSL1 405 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
ATG3-205ENST00000488910 POTEB2H3BUK9 544 aa20.49■□□□□ 0.87
ATG3-205ENST00000488910 ZNF865P0CJ78 1059 aaPredicted RBP20.49■□□□□ 0.87
ATG3-205ENST00000488910 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
ATG3-205ENST00000488910 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
ATG3-205ENST00000488910 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
ATG3-205ENST00000488910 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
ATG3-205ENST00000488910 CYP21A2P08686 494 aa20.48■□□□□ 0.87
ATG3-205ENST00000488910 RARBP10826 455 aa20.48■□□□□ 0.87
ATG3-205ENST00000488910 AKR1A1P14550 325 aa20.48■□□□□ 0.87
ATG3-205ENST00000488910 TAL1P17542 331 aaPredicted RBP20.48■□□□□ 0.87
ATG3-205ENST00000488910 FAM133AQ8N9E0 248 aa20.48■□□□□ 0.87
ATG3-205ENST00000488910 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
ATG3-205ENST00000488910 TNKSO95271 1327 aa20.48■□□□□ 0.87
ATG3-205ENST00000488910 ALPK3Q96L96 1907 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 KBTBD13C9JR72 458 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
ATG3-205ENST00000488910 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
ATG3-205ENST00000488910 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 KIAA1211Q6ZU35 1233 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 FGD4Q96M96 766 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 ABHD16BQ9H3Z7 469 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 FAM184BQ9ULE4 1060 aa20.47■□□□□ 0.87
ATG3-205ENST00000488910 COLQQ9Y215 455 aaPredicted RBP20.47■□□□□ 0.87
ATG3-205ENST00000488910 CNTN2Q02246 1040 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 LRRC41Q15345 812 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 ASPRV1Q53RT3 343 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 MUM1L1Q5H9M0 696 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 IFIT1BQ5T764 474 aaKnown RBP20.46■□□□□ 0.87
ATG3-205ENST00000488910 C7orf61Q8IZ16 206 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 XPNPEP3Q9NQH7 507 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
ATG3-205ENST00000488910 CYP39A1Q9NYL5 469 aa20.46■□□□□ 0.87
ATG3-205ENST00000488910 ASB14A6NK59 587 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 SEC23AQ15436 765 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 ARMCX2Q7L311 632 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 WDR19Q8NEZ3 1342 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 DNAH12Q6ZR08 3092 aa20.45■□□□□ 0.86
ATG3-205ENST00000488910 PARP1P09874 1014 aaKnown RBP20.44■□□□□ 0.86
ATG3-205ENST00000488910 LRRC26Q2I0M4 334 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 CYB5R4Q7L1T6 521 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
ATG3-205ENST00000488910 RNF180Q86T96 592 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 NCOA7Q8NI08 942 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 UBA5Q9GZZ9 404 aa20.44■□□□□ 0.86
ATG3-205ENST00000488910 ZHX1Q9UKY1 873 aaPredicted RBP20.44■□□□□ 0.86
ATG3-205ENST00000488910 SOWAHBA6NEL2 793 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 E7EWF7 191 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 DUSP11O75319 330 aaKnown RBP20.43■□□□□ 0.86
ATG3-205ENST00000488910 MYCNP04198 464 aaPredicted RBP20.43■□□□□ 0.86
ATG3-205ENST00000488910 NSMFQ6X4W1 530 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 MAF1Q9H063 256 aa20.43■□□□□ 0.86
ATG3-205ENST00000488910 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
ATG3-205ENST00000488910 ERICH2A1L162 156 aa20.42■□□□□ 0.86
ATG3-205ENST00000488910 SART3Q15020 963 aaKnown RBP20.42■□□□□ 0.86
ATG3-205ENST00000488910 MCM3APO60318 1980 aa20.42■□□□□ 0.86
ATG3-205ENST00000488910 LOC102724159A0A0B4J2E5 919 aa20.41■□□□□ 0.86
ATG3-205ENST00000488910 IFIT3O14879 490 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms