RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 POLR3GLQ9BT43 218 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 RNF208Q9H0X6 261 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 FBXO40Q9UH90 709 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PCDHB11Q9Y5F2 797 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 DNMT3AQ9Y6K1 912 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 MYH7P12883 1935 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 AK9Q5TCS8 1911 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PATL2C9JE40 543 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 NKRFO15226 690 aaKnown RBP eCLIP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 TLR3O15455 904 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 NR1I2O75469 434 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 S1PR4O95977 384 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 HLA-DOAP06340 250 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 ZEB1P37275 1124 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 GGCXP38435 758 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 FLT3LGP49771 235 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 TTF1Q15361 905 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 ATP2B3Q16720 1220 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 HSP90AB4PQ58FF6 505 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 CATSPERGQ6ZRH7 1159 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 ATG9AQ7Z3C6 839 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 CLP1Q92989 425 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 KAZALD1Q96I82 304 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 LMAN2LQ9H0V9 348 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 TDRD3Q9H7E2 651 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 VEZTQ9HBM0 779 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PRKAG3Q9UGI9 489 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 FCF1Q9Y324 198 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PCDHA11Q9Y5I1 949 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PLXNA1Q9UIW2 1896 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 KBTBD13C9JR72 458 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 WDR46O15213 610 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 MAPK1P28482 360 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 CTGFP29279 349 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 MAGEA10P43363 369 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ERVK-9P63128 1117 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ERVK-24P63145 666 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 PDXDC2PQ6P474 469 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 MOB2Q70IA6 237 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 SH3BP5LQ7L8J4 393 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 TTC6Q86TZ1 520 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 VPS37DQ86XT2 251 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 MICALL1Q8N3F8 863 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 KLHDC9Q8NEP7 349 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 DPF3Q92784 378 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 SUCLG2Q96I99 432 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 GUCD1Q96NT3 240 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 UBE2OQ9C0C9 1292 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 SIL1Q9H173 461 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ASCC2Q9H1I8 757 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 USP40Q9NVE5 1235 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 HOXC10Q9NYD6 342 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 C9orf78Q9NZ63 289 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 NOD1Q9Y239 953 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ZMYM6O95789 1325 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 RBM47A0AV96 593 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 LCE2BO14633 110 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 IPO8O15397 1037 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ZEB2O60315 1214 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 CNMDO75829 334 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 C1RP00736 705 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 PCP11498 1178 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 HERVK_113P62684 666 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 ARID5BQ14865 1188 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 LRRFIP1Q32MZ4 808 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 RIOX2Q8IUF8 465 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 NPAS4Q8IUM7 802 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 GLYCTKQ8IVS8 523 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 PCSK9Q8NBP7 692 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 TMEM39BQ9GZU3 492 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 TMPRSS4Q9NRS4 437 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 RAB6BQ9NRW1 208 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 PCDHGA11Q9Y5H2 935 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 TACC3Q9Y6A5 838 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 PFASO15067 1338 aa3.32□□□□□ -1.88
DEPDC1-203ENST00000488146 MYH8P13535 1937 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 NOVP48745 357 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 RGS3P49796 1198 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 CDK7P50613 346 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SEC13P55735 322 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 IRX3P78415 501 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 MRPS5P82675 430 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 GHRHRQ02643 423 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 GABPAQ06546 454 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SBK1Q52WX2 424 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SLC39A5Q6ZMH5 540 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 BMP8AQ7Z5Y6 402 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 GPR142Q7Z601 462 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 CCDC155Q8N6L0 562 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 CHST13Q8NET6 341 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 NSUN4Q96CB9 384 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SLC9A7Q96T83 725 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 PRR14Q9BWN1 585 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SAP130Q9H0E3 1048 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SEMA6BQ9H3T3 888 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 PRKAG2Q9UGJ0 569 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 SERTAD1Q9UHV2 236 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 FAM50BQ9Y247 325 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms