RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 COPB2P35606 906 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 OAZ1P54368 228 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 EVCP57679 992 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 NOM1Q5C9Z4 860 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 SNRNP48Q6IEG0 339 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 HOMER1Q86YM7 354 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 SPATC1LQ9H0A9 340 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 CPVLQ9H3G5 476 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 BTBD7Q9P203 1132 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
NUP50-216ENST00000486184 NID2Q14112 1375 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 SLC25A27O95847 323 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 SMARCA1P28370 1054 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 STAT3P40763 770 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 FCGRTP55899 365 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 SNAP25P60880 206 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 TRAF1Q13077 416 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 TMEM132BQ14DG7 1078 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 NCAPG2Q86XI2 1143 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 SPZ1Q9BXG8 430 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
NUP50-216ENST00000486184 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 LIMCH1Q9UPQ0 1083 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
NUP50-216ENST00000486184 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 PEX10O60683 326 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 CNMDO75829 334 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 CDKL5O76039 1030 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 ICAM1P05362 532 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 MAPK4P31152 587 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 MCM2P49736 904 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 LBX1P52954 281 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 PIBF1Q8WXW3 757 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 MROH8Q9H579 483 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 ZNF214Q9UL59 606 aaPredicted RBP13.2□□□□□ -0.3
NUP50-216ENST00000486184 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
NUP50-216ENST00000486184 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 ZBTB5O15062 677 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 ALAS1P13196 640 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 CDC27P30260 824 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
NUP50-216ENST00000486184 PSMC4P43686 418 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 Q3C1V9 767 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 USH1GQ495M9 461 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 FBXO11Q86XK2 927 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 RIOX2Q8IUF8 465 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
NUP50-216ENST00000486184 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 COA7Q96BR5 231 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 PIGSQ96S52 555 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 RIOX1Q9H6W3 641 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
NUP50-216ENST00000486184 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
NUP50-216ENST00000486184 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
NUP50-216ENST00000486184 ZNF236Q9UL36 1845 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 ABCB11O95342 1321 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 CNTNAP5Q8WYK1 1306 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 PFKFB2O60825 505 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 ERCC3P19447 782 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 HOXD10P28358 340 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 EFCC1Q9HA90 598 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
NUP50-216ENST00000486184 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
NUP50-216ENST00000486184 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms